Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0263 ATGGTTAAGAGAGAATCTAGCAACAAAAAGAAAAAGATTGAAGCTGCATCATGCAAAAAAGGTGATAGTTCAAATTTTGTAACTATCATGGTGAATGCAAATGAGGCTAGAAGAAAGCTTTATTTGAAAGACAGGGTTAGTCGACAAAAGACCCCAACAAGTGTTTACAAAGGTGTCCGACTTAGGAAATGGGGAAGGTATTCAGCGGAGATTAATGATCCGTTTGCAAAGAAAAGGTATTGGCTTGGTACTTTTGATGATGAGATACAAGCTGCTATAGCTTATAGCAGAAAAATGGATGAGATTGAAGAAAAGAAGTTAGCTGCAAGTGATGATTTAGATATTAATCAAAGGTGTAGGGAATGTGGTGGTCGTTTTAACTACGATGATCCTTCTGATGATGATGATAACAGCAACATTGGTGGTGGTGGTTCAAATCATATGTTTGGCATGCAGGAGATTCAAGCTTTAATCAATTAG 480 0.3708 MVKRESSNKKKKIEAASCKKGDSSNFVTIMVNANEARRKLYLKDRVSRQKTPTSVYKGVRLRKWGRYSAEINDPFAKKRYWLGTFDDEIQAAIAYSRKMDEIEEKKLAASDDLDINQRCRECGGRFNYDDPSDDDDNSNIGGGGSNHMFGMQEIQALIN* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0263 159 MobiDBLite consensus disorder prediction 125 145 - -
Mal8g0263 159 ProSiteProfiles AP2/ERF domain profile. 55 116 IPR001471 GO:0003700|GO:0006355
Mal8g0263 159 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 28 108 - -
Mal8g0263 159 SUPERFAMILY DNA-binding domain 54 101 IPR016177 GO:0003677
Mal8g0263 159 SMART rav1_2 55 106 IPR001471 GO:0003700|GO:0006355
Mal8g0263 159 Gene3D AP2/ERF domain 55 108 IPR036955 GO:0003700|GO:0006355
Mal8g0263 159 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Mal8g0263 159 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Mal8g0263 159 CDD AP2 54 99 IPR001471 GO:0003700|GO:0006355
Mal8g0263 159 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF120-RELATED 28 108 - -
Mal8g0263 159 Pfam AP2 domain 54 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0263 Mal-Chr8 3815709 3816188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0263 53 125 AP2-EREBP Transcription Factor Family AT1G49120 43.836 2.91e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal8g0263 AP2 7.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0263 - - mtr:MTR_5g095100 118.242