Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0247 ATGACGTTGTGTTCTAGAGTTGTTGTAGTTTTGTTTGTTATGGTTTTTGTTATGATGATGGTTGAGGTGGATTTAGCAGAATGTGTTAAAGGGGGTGTTAGGAATTACATTAGTTGGCAAGATATGATGGTGGATGAACAAAGGTTACTTTTGAAGAAGAGCAATTATATTCTTAACAATGATGTTAGAGTTATTGTTGTTTGTCAAAATGGAAATGGACATTCCAAAACTGTTCAAGGAGCAGTTGATTTGGTTCCTGATGGGAATAAACAAAGAGTCAAAATCAACATTTTCCCAGGAATTTACAGAGAAAGAGTGTTTGTGCCAAATACAAAGCCTTATATATCATTTATAGGTAGAAGAAATCAAACATCAAGTCCTGTAATTACTTGGAACAGTAAATCATCAGACAGAGGCCCAAATGGTCAAGAATTAGGCACATATGGTTCAGCAACTGTAGCAATTGAATCAGATTTTTTCTGTGCAACTGAGGTCACTTTTGAGAATACAGTGGATGCATCAGCAGGTGGACAAGGAATGCAAGCAGTGGCACTAAGGGTAGACAGTGATAGAGCAATGTTCTATAGAGTTAAGATTAAAGGAACACAAGACACTCTCTTGGACAACACAGGAAATCATTACTTCTACAAGTGTGTCATCCAAGGAAAAGTTGATTTCATCTTTGGTAATGCAAAGTCACTCTATGAGAAGTGTAGGCTTCAATCAACAGCTGAGAAATATGGAGCAATTGCAGCACATCATAGGGATTCGCCGCTTCAAGATACAGGATTTTCTTTTGTAAGATGCATTATTAGTGGAACAGGAAGTGTGTACCTTGGAAGAGCTTGGGGGGACTACTCAAGAGTAATTTATTCAAATTGTCATATGGATGATATTATTATTCCAGAAGGATGGACAGATTGGAATCATCCAGAAAGAGATAAGACTGCAGTGTTTGGTGAATATAAGTGCCATGGAAAAGGAGCAAATATAAAGAATAGGGTGCCTTGGTCAAAACAATTCAGCTATGGAGAAGCAAAGCCTTTCTTGGACATTAACTTCATAAATGGAAACCAGTGGCTTAGACTGTAG 1092 0.3745 MTLCSRVVVVLFVMVFVMMMVEVDLAECVKGGVRNYISWQDMMVDEQRLLLKKSNYILNNDVRVIVVCQNGNGHSKTVQGAVDLVPDGNKQRVKINIFPGIYRERVFVPNTKPYISFIGRRNQTSSPVITWNSKSSDRGPNGQELGTYGSATVAIESDFFCATEVTFENTVDASAGGQGMQAVALRVDSDRAMFYRVKIKGTQDTLLDNTGNHYFYKCVIQGKVDFIFGNAKSLYEKCRLQSTAEKYGAIAAHHRDSPLQDTGFSFVRCIISGTGSVYLGRAWGDYSRVIYSNCHMDDIIIPEGWTDWNHPERDKTAVFGEYKCHGKGANIKNRVPWSKQFSYGEAKPFLDINFINGNQWLRL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0247 363 Gene3D - 60 363 IPR012334 -
Mal8g0247 363 PANTHER PECTINESTERASE QRT1 14 363 - -
Mal8g0247 363 SUPERFAMILY Pectin lyase-like 64 361 IPR011050 -
Mal8g0247 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 363 - -
Mal8g0247 363 Pfam Pectinesterase 65 358 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0247 Mal-Chr8 3648692 3650579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0247 1 315 Carbohydrate Esterase AT5G55590 56.627 1.50e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0247 K01051 - gmx:100804220 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0247 8 3648692 3650579 Mal8g0247 8 3648692 3650579 ECH