Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0239 ATGGCCAACAATGATACAAACGAGCCCTTGCTATTCAGATCACAGGACACTGCAGCTCAAAAGGCTAAAGGACGGTTAAACCAAAGAAGGTTCCTCCGTTCTAGAAGTGCTCCTCACACAGATCATGCTCCTCTGGTGACAAACCGCAACAAGTCAATTCCCCTTTCTGAGTCCATATTTGGGAATCTACATCCAAGCTTTAAAAACGTGGCTATAGTCCTTATGGTCTATTTAGGTGTAGGAACTTTAATCTTCTACCTTGTCAGGAACCAAATCAAGGGAATGAAAACGGACAGATTCCTGGATGCCTTATACTTTACAATTGTGACAATGACCACAGTTGGATATGGTGACCTTGTGCCTAATAGTGATCTTACAAAAATACTCGCGTGCGCTTTTGTTTTCTCCGGAATGGCTTTGATGGGACTAATCCTAAGCAAAGCAGCAGATTACTTGGTCGAGAAGCAAGAAGTTTTGTTAATTAAAGCGATGCACATGCACCAAAAAGTTGGTCCAAGTGAAATTTTAAAGGAGCTTGAGACCAATAAAACAAGATACAAATTTTTTCTGGTCTTTTTCATTCTTTTGATTCTCATTATTGTGGGGACAATCTTCCTAGTTACTATTGAGAAATTGGATGTTATTGATGCCTTGTACTGTGTTTGTTCAACAATTACAACTCTTGGTTATGGAGATAAAAGTTTCTCTACTCAAGCTGGAAGAATATTTGCAGTGTTTTGGATATTAACAGGTACTATTTGTTTAGCTCAGTTTTTCCTCTACATTGCTGAACTAAACACTGAAAGCAGACAAAAGGCAATTGTCAATTGGGTTCTTACAAGGAAAATGACCAATTATGATTTGGAAGCTGCAGATCTTGATGAGGATGGGACTGTTGGGGCTGCTGAATTTGTTATTTATAAGCTCAAAGAGATGGGGAAGATTACTCAAGAAGATATAACACTTGTAATGAAGGAGTTCGAAGAGCTTGACGTTGATCAGTCTGGTACACTGTCAGTTTCTGATATAACACTTGCTCAATCATCTTAA 1050 0.3876 MANNDTNEPLLFRSQDTAAQKAKGRLNQRRFLRSRSAPHTDHAPLVTNRNKSIPLSESIFGNLHPSFKNVAIVLMVYLGVGTLIFYLVRNQIKGMKTDRFLDALYFTIVTMTTVGYGDLVPNSDLTKILACAFVFSGMALMGLILSKAADYLVEKQEVLLIKAMHMHQKVGPSEILKELETNKTRYKFFLVFFILLILIIVGTIFLVTIEKLDVIDALYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTICLAQFFLYIAELNTESRQKAIVNWVLTRKMTNYDLEAADLDEDGTVGAAEFVIYKLKEMGKITQEDITLVMKEFEELDVDQSGTLSVSDITLAQSS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0239 349 Gene3D - 64 158 - -
Mal8g0239 349 Gene3D - 169 277 - -
Mal8g0239 349 SUPERFAMILY Voltage-gated potassium channels 180 283 - -
Mal8g0239 349 Pfam Ion channel 72 153 IPR013099 -
Mal8g0239 349 Pfam Ion channel 194 266 IPR013099 -
Mal8g0239 349 SUPERFAMILY Voltage-gated potassium channels 70 166 - -
Mal8g0239 349 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mal8g0239 349 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mal8g0239 349 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 19 342 - -
Mal8g0239 349 SUPERFAMILY EF-hand 277 344 IPR011992 -
Mal8g0239 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 19 342 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mal8g0239 349 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Mal8g0239 349 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0239 Mal-Chr8 3589406 3591273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0239 54 349 Ion Channels AT5G55630 66.216 1.11e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0239 K05389 - gmx:100777388 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0239 8 3589406 3591273 Mal8g0239 8 3589406 3591273 ECH