Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0236 ATGGTTGCTGCCTTATTTGGAAGTAAGGGTGTATTGTCTTACATTCTCGGAACTGTCGTGGCTCTTCATTGTGCTGTTTCTGGTTGTTCTGCTGCTTCTACCGAGGTTATCAAGCTTTTGCTTGATGCATCTGCGGATGTAAGTTCCATTGATGCAACTGGTAACCAGTGCAGCGACTTGATTGTCTCAGTTTCTAATAGTATCTTCAGTTCAAGGAAGAGGATACTACAAGCCATACTAAAAGGTTTAGATGGTGTTGATGGTGACAGCAATTTCCTTAAGGAAGTAGGTTTCCTAATAGAGGAGCAGCAAGAAGATGTAGGTACACCTCGAACTGAGAAGAAAGATTATCCGATCGTTCCATCCCTGCCTGATATAAAGAATGGGATATATTGTACAGATGAATTTAGGATGCTTACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACTGAGTGCCCCTTTGTTCATCCAAGGGAAAACGCAAGGCGTTGTGATCCGAGGAAATATCATTACACCTGTGTCCCATGGCCCGAGTTTCGGAAGAGATCATGCAACAAAGGGGATGCTTGTGAATATGCACATGGTATTTTTGAATGTTGGCTTCATCCTTCTCAATACAAAACAAGGATTTGCAAGGATGAAACCGAATGCACTAGAAGGGTTTGCTTTTTCGCTCACAAACCCGAGGAGCTTCGACCGTTGTATGCTTCTACTGGTTCTTCTTTGTCTTCACCTACATCATATTCAAACTCACCTAGTGCTTCTTCAATGGATTCTTTCACAATGAGCTCTACGTCTTCTTTGATACAATCAGTGTCAACGCCACCTTTTACTCCATCTACAACATCATCACCTGCGGCTGGAACCATGTGGCAAACTCAGATTCAACTTCATACTGCTGTCCCTACCCTTCAGATGCCCAGAAGCAGAATGAAAACTGCATTGAATGCTAGAGATAGCACTGAATTTCTTGAACTTGAAAACAGCCTTAATAGGAAGTTAATGATGGAAAAGATGACAGGTCTTTCATACCCTTCAGATAGGCTTACAGGAGTGAATCCTACTAGCCTTGAAAACATTTTCGGGTCATCAATACAATCTTCAGCAACAATGCAGGTGCATCAGAATGCGAACCAACAACTTTGGGGCTATCCTTCTGATCTTACCAATTCAAATGTGATTGGATCACCACAATTCAGAGTTGATGCCTTTTCAAAGAGGAGCCAGAGCTTTATTGAGCGCAGCAGCGTGGCGAGCTTTAATTCCGAGCTTCCTTCTGCTACCTCAGTTGCCATGGAGCCTTCTACCTTCTCTGGTTGGAGCTCCCCTAATGGAAAATTAGATTGGTCCATCCTCAATGATGAACTCAATAAAATGAGGAAATCTTATTCTTTCGGCTTTCGAAACAGAAGTACAACTTCAACAATGGCTTCTGCATCAAAAGCCGATGATCCAGATGTATTTTTAAGCCATGATTCTTGGGTTAATTCACTTGTAAAGGATGCTCCAACTATGGAATTTGATCAATATTGTGTTGAAGTTGAAGATCAACTGCAATGCCATTATCCAGACCTAGTTCCGTCTTGGCCGGAGAAATTGTACATGGAGCATGAGCACATGGTGGTGTGA 1644 0.4234 MVAALFGSKGVLSYILGTVVALHCAVSGCSAASTEVIKLLLDASADVSSIDATGNQCSDLIVSVSNSIFSSRKRILQAILKGLDGVDGDSNFLKEVGFLIEEQQEDVGTPRTEKKDYPIVPSLPDIKNGIYCTDEFRMLTFKVKPCSRAYSHDWTECPFVHPRENARRCDPRKYHYTCVPWPEFRKRSCNKGDACEYAHGIFECWLHPSQYKTRICKDETECTRRVCFFAHKPEELRPLYASTGSSLSSPTSYSNSPSASSMDSFTMSSTSSLIQSVSTPPFTPSTTSSPAAGTMWQTQIQLHTAVPTLQMPRSRMKTALNARDSTEFLELENSLNRKLMMEKMTGLSYPSDRLTGVNPTSLENIFGSSIQSSATMQVHQNANQQLWGYPSDLTNSNVIGSPQFRVDAFSKRSQSFIERSSVASFNSELPSATSVAMEPSTFSGWSSPNGKLDWSILNDELNKMRKSYSFGFRNRSTTSTMASASKADDPDVFLSHDSWVNSLVKDAPTMEFDQYCVEVEDQLQCHYPDLVPSWPEKLYMEHEHMVV* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0236 547 MobiDBLite consensus disorder prediction 240 261 - -
Mal8g0236 547 ProSiteProfiles Zinc finger C3H1-type profile. 177 202 IPR000571 GO:0046872
Mal8g0236 547 Gene3D - 177 238 - -
Mal8g0236 547 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 1 546 - -
Mal8g0236 547 MobiDBLite consensus disorder prediction 241 261 - -
Mal8g0236 547 PANTHER UNKEMPT FAMILY MEMBER 1 546 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0236 Mal-Chr8 3560886 3562561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0236 1 471 C2H2 Transcription Factor Family AT5G12850 39.929 1.48e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal8g0236 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0236 - - mtr:MTR_1g075890 706.827