Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0226 ATGAGAACAATTCTTCCAAAACATGCAAAGATATCTGAAGAAAGCAAGGATACAATTGTGGAATGTGCAGCTGAATTCATTAGCTTTGTTACTGCGGAGGCCAACCATTACTGCAAATTGGAGAGTAGAACAACAATTACTGCTAATGATTTGTTAAATACTTTGGCAAATTTTTTTACTGCTAAGTATTCCCTCCGCTACATCCAACTTTTTCGTCATCATGCTAGTGTACGTCAATACACTCCTCCACCTCCACCGACGTCTCAGGCTTTTCATGTGTACGATTTGTTATTTGCACCTCCTGACCCAAATCTTGCATCACTGACGTGCACAGCAGAGCAGAAGCAGATACCTTCTTTCCTGACGCGCACAGTTGCTATTGGTTTTTAG 390 0.4128 MRTILPKHAKISEESKDTIVECAAEFISFVTAEANHYCKLESRTTITANDLLNTLANFFTAKYSLRYIQLFRHHASVRQYTPPPPPTSQAFHVYDLLFAPPDPNLASLTCTAEQKQIPSFLTRTVAIGF* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0226 129 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 52 IPR003958 -
Mal8g0226 129 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 79 - -
Mal8g0226 129 SUPERFAMILY Histone-fold 1 59 IPR009072 GO:0046982
Mal8g0226 129 Gene3D Histone, subunit A 1 77 IPR009072 GO:0046982
Mal8g0226 129 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 79 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0226 Mal-Chr8 3485390 3485872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0226 1 63 CCAAT-HAP3 Transcription Factor Family AT5G47670 53.968 3.08e-18 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal8g0226 CBFD_NFYB_HMF 1.2e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0226 K08065 - sspl:121764178 77.0257