Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0225 ATGGCTTCAGGAGATCCAAATCAGCTTGGAGAGTCAAGCTCAAAGAATGGGGTGCAACCAAATACTTCAAGGGTGCAAGAATTTTCACGAGCCTTTCCCATTGCAATTGTGCATAGATTGATGAAAAGAATTCTTCCAAAACATGCAAAGATATCTGAAAAAGGCAAGGAAACTGTGGTGGAATGTGCTGCTGAATTCATTAGCTTTGTAACTGCGGAGGCCAACCATTACTGCAAATTGGAGAGTAGAACAATAATTACTGCTGAAGATTTGTTAAATACTTTGGAAAAATTGGGTTTTGAGGTGTATGCTAAGTATTCCTTCCGCTACTTCCAAATTTTTCGTCATTGTTCTCAAGTACGTCAATACGCTCCCCCACCTCCACCGGCGCCTCAAGTTTTTCATGCTCGCGTAAGTCAATACGCTCCCCCACCTCCACCTCCACCTCCACCGGCGCCTCAAGCTTTTCAAGCTCATGATTTTCCTTTGGATCCAAACTTTGTGTTTCCCGACCCAACAGACATGGATGCAATTTTTGGAGATGATTTCCAATTGGATCCAAACTTTGTGTTTCCCGACCCAATGGAAATGGGTGCAATTTTTGGAGATGATTTTCCATTAGATCCAAACTTTGTGTTTCCCAACCCAACAGAAATGGGTGCAATTCGTGGAGATGATGATGCTAGAGAACTTGGTGCTGGTGGAGATGGTGGTGATTGCAACTCAAGTGATGGAAGCTTTGATCTTATTGCTTCTCTTAATGGTGATGAATGA 774 0.4289 MASGDPNQLGESSSKNGVQPNTSRVQEFSRAFPIAIVHRLMKRILPKHAKISEKGKETVVECAAEFISFVTAEANHYCKLESRTIITAEDLLNTLEKLGFEVYAKYSFRYFQIFRHCSQVRQYAPPPPPAPQVFHARVSQYAPPPPPPPPPAPQAFQAHDFPLDPNFVFPDPTDMDAIFGDDFQLDPNFVFPDPMEMGAIFGDDFPLDPNFVFPNPTEMGAIRGDDDARELGAGGDGGDCNSSDGSFDLIASLNGDE* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0225 257 MobiDBLite consensus disorder prediction 1 24 - -
Mal8g0225 257 SUPERFAMILY Histone-fold 30 119 IPR009072 GO:0046982
Mal8g0225 257 Gene3D Histone, subunit A 19 124 IPR009072 GO:0046982
Mal8g0225 257 MobiDBLite consensus disorder prediction 219 246 - -
Mal8g0225 257 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 7 131 - -
Mal8g0225 257 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 92 IPR003958 -
Mal8g0225 257 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 131 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0225 Mal-Chr8 3456272 3459283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0225 26 160 CCAAT-HAP3 Transcription Factor Family AT1G21970 39.416 3.37e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal8g0225 CBFD_NFYB_HMF 3.7e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0225 K08065 - mtr:MTR_5g095920 111.309