Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0193 ATGGAAAATGCTAGGGAGGATGAGATTGAGGACAACATGTCAATGCCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCACAATAGGTATTCAGAGATTGACATTCAAGTTCAGGAATCCAGTTTCAACCAAGATCCCCCTCTCCCTGTATATCTCAAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATCTCCAAACAGCTTCCAGAAACCCTGTAAAGACAATGATGTCAAAGGTAGTAACACAACACCATGTAGAAGAAAATAACAAATGTAAGACAATTTTAAAGGGTATCACAGGAAGCATTGGCCCCAGCGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACATTGTTAAGAGTTGTAGGAGGAAGATTACTTGATAATGTAAAGGGAAAGATATCTTACAATGACGTTCCATATAGTCCTGCTCTAAAAAGAAGGATTGGATTTGTAACACAAGAGGATGTGCTTTTCCCACAACTTTCAGTTGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAACAAAAATATGCAAGAGTTGAGAACACTGTCAAGGATCTAGGCCTAGAAAGATGTCGCCACACGAAAATAAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGAGCCTTCACTGCTACTACTTGATGAGCCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTCCTTCTCACTCTTCAGGGATTAGCCAAGGCTGGAAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACACGTTTCACAAACTTCTTCTGATATCAGAAGGCTCTCCTGTCTATTATGGGAAGGCTAGAGACACAATGGAGTACTTTTCATCCTTGAGGTTCGTCCCGGAAATACCAATGAATCCAGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAAGTATTCCACAAGATATCTTGAAAGATCAAGACTCCACTGACCCTTCAACAGCGATCATTAAGTATGTACAACTCAAGTATAAAGACATACTGGAGCCAAAGGAAAAAGAAGAGAATCATAGAGGAGCAAACACACCAAAACATCTTCAACTAGCTATTCAGGTTAAAAAGGAATGGACAGTGAGTTGGTTAGACCAATTCACCATTCTTTATAAGAGAACATATAAAGCAAGATTCAAGGAATATTTTGATATATTAAGATTGGTTCAAGCACTTGGAATTGCACTTCTATTAGGCCTACTTTGGTGGAAATCTTCAACTAATACAGAGGCTCAACTCCGAGATCAGGTTGGTTTAATGTTCTATATTTGTATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTATTTCCATTTGAAAAGGTATACTTAAGAAAAGAAAGGAAAGCAGACATGTATAGACTTAGTGTATACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACTGTTTTCATGCTTATTGTGTACTTCATGGCTGGCTTTAAGAGCACCGCCGCTTGCTTCTTCCTTACGTTATTCGCTGTTTTGCTAATAGCTATAACAAGTCAAGGAGCAGGAGAGCTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAATGGTTGAAGTATATGTCATTCATGTACTATGGATTCAGGCTTCTACTAAAAGTGCAATATTCAGGAGACCAACTATATGAATGTGAAAGTGATGGAGGGTGCAGGCCACTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGTGGTTTAACTGAAGTTTGGGTTTTGATAGCCATGGCTCTTTGCTTTCGGTTTTTGGCTTACTTTTGTCTACGCAGAAAGATTGATGTATGA 2046 0.3959 MENAREDEIEDNMSMPPPSVGSMQIAGSNGFGHSMEFMSQAYLHNRYSEIDIQVQESSFNQDPPLPVYLKFEDVEFKVRNLQTASRNPVKTMMSKVVTQHHVEENNKCKTILKGITGSIGPSEILALMGPSGSGKTTLLRVVGGRLLDNVKGKISYNDVPYSPALKRRIGFVTQEDVLFPQLSVEETLIFSAFLRLPTNMSKQQKYARVENTVKDLGLERCRHTKIKGISGGERKRTSIGYEILVEPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHTFHKLLLISEGSPVYYGKARDTMEYFSSLRFVPEIPMNPAEFLLDLATGQVNDISIPQDILKDQDSTDPSTAIIKYVQLKYKDILEPKEKEENHRGANTPKHLQLAIQVKKEWTVSWLDQFTILYKRTYKARFKEYFDILRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLIVYFMAGFKSTAACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESDGGCRPLQSSPSFDTVNLKGGLTEVWVLIAMALCFRFLAYFCLRRKIDV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0193 681 CDD ABCG_EPDR 106 311 - -
Mal8g0193 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 322 IPR027417 -
Mal8g0193 681 SMART AAA_5 121 314 IPR003593 -
Mal8g0193 681 Pfam ABC transporter 112 257 IPR003439 GO:0005524
Mal8g0193 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 97 329 IPR003439 GO:0005524
Mal8g0193 681 Pfam ABC-2 type transporter 414 622 IPR013525 GO:0016020|GO:0140359
Mal8g0193 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 678 - -
Mal8g0193 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 678 - -
Mal8g0193 681 Gene3D - 97 324 IPR027417 -
Mal8g0193 681 Pfam ABC-2 type transporter 286 347 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0193 Mal-Chr8 3059039 3065875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0193 125 311 Calmodulin-binding Proteins AT2G36910 26.020 3.13e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0193 K05681 - gmx:100815259 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0193 8 3059039 3065875 Mal8g0193 8 3059039 3065875 ECH