Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0192 ATGAATTCTAGGTGCTTGTTGAACTCCAACAGCATAGTTCAATCTTCTTCAAATTCTGAAACAGGAGAAGAAAGAGTGACTAGTCCTAGAAATAGGCCTCAACATGCCTCGTCGCCTTCGTTTTCGGTTAGGATGGCCATGAGAATATCTAGATCAAGATGGTTTACCTTGTTAAGAAGAGTTTTCCATTATCAAAATGGATCAAGGTCTAATCTTGGTTCTAATCCTTTCAATTCAAGCACTTGGTTGATGTTGGAGTTTATTGCTTTGATTGTTCAAATAATCATTTCAACTTTCACTTTGGTTATTTCAAAGAGGGAGAAACCTGTTTGGCCTATGAGGATTTGGATATCTGGTTATGATATTGGATGTGTTCTTAATTTGCTTACGGTTTACGGTCGATACCGACAAATTTATCTGATTCAAGAAGATGATCTTAGTCTTTCTGATATGGAACAACAGAGAAACAGTGGAGAAACAAGGACATCATTGGAGTTTTTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTCGACTCACGATTTGGTTCATTTCAACAAGCTCCAAAACTTCATGTCCTCTGCATCACCTTGCTTACTTGGAATGCAATCTGCTACTCTTTCCCTTTCCTTCTTTTTCTCCTGTTATGTTGCTGTGTACCACTGATCAGTACCCTCCTTGGTTACAACATGAACATAGCCTCTGCTAATAAAGGAGCATCTGATGAACAAATTTCACAACTTCAAAGTTGGAGACATAAAGAACCTCATACTACCAAGTTAGAGCTTGGCAATGACTCTGAAAGCATTGAAAATTTTATCAATGAAGATCCGGAATGTTGCATTTGTTTAGCAAAGTACAAAGATAAAGAAGAACTTAGACAATTGCCATGCTCTCATGTGTTTCACCTAAAATGTGTGGACCAGTGGCTGAAAATTATATCATGCTGCCCACTTTGCAAACAAGGATTAGAGAGGTAG 987 0.3799 MNSRCLLNSNSIVQSSSNSETGEERVTSPRNRPQHASSPSFSVRMAMRISRSRWFTLLRRVFHYQNGSRSNLGSNPFNSSTWLMLEFIALIVQIIISTFTLVISKREKPVWPMRIWISGYDIGCVLNLLTVYGRYRQIYLIQEDDLSLSDMEQQRNSGETRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASANKGASDEQISQLQSWRHKEPHTTKLELGNDSESIENFINEDPECCICLAKYKDKEELRQLPCSHVFHLKCVDQWLKIISCCPLCKQGLER* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0192 328 MobiDBLite consensus disorder prediction 1 24 - -
Mal8g0192 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 327 IPR013083 -
Mal8g0192 328 SUPERFAMILY RING/U-box 274 326 - -
Mal8g0192 328 SMART ring_2 282 322 IPR001841 -
Mal8g0192 328 CDD RING-H2_RNF111_like 280 323 - -
Mal8g0192 328 Pfam RING-like zinc finger 281 309 IPR001841 -
Mal8g0192 328 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 327 - -
Mal8g0192 328 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 14 327 - -
Mal8g0192 328 MobiDBLite consensus disorder prediction 1 39 - -
Mal8g0192 328 ProSiteProfiles Zinc finger RING-type profile. 282 323 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0192 Mal-Chr8 3050533 3052955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0192 33 326 C3H Transcription Factor Family AT4G26580 63.607 6.41e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0192 - - gmx:100813670 532.332