Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0178 ATGAATACTAAGTCGGTTGAAGATTTAATGGAGAGTTCAACTGAGGCTCATTTTTCTGGATTTCATATGGATGATGGATTAGAGCAAAGAAAAGCTGGCACTGTGGAACCAACCACTTCTGCATTTGATGAGTATAGACAACCTTTTGTCATAGGTGTTGCTGGGGGATCAGCATCCGGCAAAACAGCAGTTTGTGATATGATTATTCAACAGCTTCATGATCAGAGGGTTGTACTTGTTAATCAGGATTCTTTTTACCATAATTTGACTAAGGAGCAACTTACAAGAGTACAAGAATACAACTTTGATCATCCTGAAGCTTTTGATACTGAGCGATTGCTATCTGTCATGGACAAATTGAAGCATAGCCAAGCAGTAGATATTCCGAAGTATGACTTTAAGGGTTACAAGAATGATGTCTTTCCCGCAAGAAGGGTAAATCCTGCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCATGATCCTCGTGTCAGGGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCAAGAAGGATTAAGCGTGATACTGCCGATAATGCTCGTAATATTGAATCAGTACTTGATCAGTATTCAAAATTTGTGAAGCCGGCTTTTGATGACTTTATCCTTCCTACAAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTGCAGCATATTCGCACAAAGCTTGGTCAGCATGACCTCTGTAAAATATATCCCAACTTATATGTCATTCAGTCTACTTTTCAGATACGGGGCATGCACACCCTGATACGTGACTCTCAGACAAAGAAGCACGACTTTGTATTTTATGCTGACCGTTTGATTCGTTTGGTCGTAGAACATGGCCTAGGGCATCTTCCATTTACAGAAAAGCAAGTTGTCGCCCCTACTGGGTCTGTATACAGCGGTGTGGATTTTTGTAAGAGGTTGTGTGGTGTCTCCATTATCAGGAGTGGGGAAAGCATGGAGAATGCTTTGAGAGCATGCTGCAAAGGTATCAAGATTGGTAAAATTCTTATTCATAGAGAAGGTGACAACGGTCAGCAGCTAATATATGAGAAGCTGCCAAATGATATCTCAGATAGGCATGTGTTACTGTTGGATCCTATCTTAGGCACAGGTAATTCTGCTGTTCAGGCAATTTCTTTAATTATAAAGAAGGGTGTACCAGAGTCCAACATTATATTTCTCAACCTCATATCAGCACCTCAAGGCTTGCATGTGGTCTGTAAAAGATTTCCGAGGTTAAAAATTGTGACATCTGAGATTGACAGTGGTTTGAATGAAGATTTCCGTGTCGTTCCTGGGATGGGTGAGTTTGGGGATCGGTACTTTGGAACAGATGATGATGACGAGCAGGAGGAAGGCCGTTCCCGGTAG 1440 0.4104 MNTKSVEDLMESSTEAHFSGFHMDDGLEQRKAGTVEPTTSAFDEYRQPFVIGVAGGSASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTKEQLTRVQEYNFDHPEAFDTERLLSVMDKLKHSQAVDIPKYDFKGYKNDVFPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIKRDTADNARNIESVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTKKHDFVFYADRLIRLVVEHGLGHLPFTEKQVVAPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLIIKKGVPESNIIFLNLISAPQGLHVVCKRFPRLKIVTSEIDSGLNEDFRVVPGMGEFGDRYFGTDDDDEQEEGRSR* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0178 479 SUPERFAMILY PRTase-like 251 468 IPR029057 -
Mal8g0178 479 Gene3D - 45 251 IPR027417 -
Mal8g0178 479 TIGRFAM udk: uridine kinase 47 248 IPR000764 -
Mal8g0178 479 PANTHER URIDINE KINASE 16 470 - -
Mal8g0178 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 241 IPR027417 -
Mal8g0178 479 PRINTS Uridine kinase signature 216 229 - -
Mal8g0178 479 PRINTS Uridine kinase signature 180 190 - -
Mal8g0178 479 PRINTS Uridine kinase signature 194 205 - -
Mal8g0178 479 PRINTS Uridine kinase signature 78 89 - -
Mal8g0178 479 PRINTS Uridine kinase signature 123 138 - -
Mal8g0178 479 PRINTS Uridine kinase signature 48 65 - -
Mal8g0178 479 CDD UMPK 50 248 IPR000764 -
Mal8g0178 479 Pfam Uracil phosphoribosyltransferase 266 467 - -
Mal8g0178 479 Gene3D - 252 467 IPR029057 -
Mal8g0178 479 Pfam Phosphoribulokinase / Uridine kinase family 50 236 IPR006083 GO:0005524|GO:0016301
Mal8g0178 479 PANTHER URIDINE KINASE 16 470 - -
Mal8g0178 479 CDD PRTases_typeI 325 440 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0178 Mal-Chr8 2869406 2875131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0178 1 470 PRT Gene Family AT4G26510 82.590 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0178 K00876 - gmx:100798205 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0178 8 2869406 2875131 Mal8g0178 8 2869406 2875131 ECH
Mal2g3441 2 52149048 52154063 Mal8g0178 8 2869406 2875131 PCT