Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0175 ATGAAATCAAGGCATTTATCAGTGGAAAAGATTTGTGGTTTACGTGTTGAACTATACCCAGAAATGTCCAAAGACAATTCCCCTATTGCATCTTTCGCGATTCGGGTTCTTAGTTGTGCTGGAAATACCAAAATCTTGACTCAATCAGAAATTAAAGATAAACTTCTTAGCAATAAGGATGGCTTTGTTTGGGAGATTGAGGTTCCATTACCTGGAAAATTCATTATTGACATTGAGTTTCTGGATTTGAAAACTACATGTCCAAATGGTGGGGAAGCTTGCTCTATTTGGCCTAATGGATTTACGAAGCAGAGACAAAATGCAGCAGCCCTTGAATCTCTAGGCCGAATGAACAAAGAAGGTATCTATACCGATATAACAATCAATGTCAATTCTGAGGGAAGCATAAGAGCTCATCGAGCTGTTCTTGCCTCACAATCACCTGTTTTTCGCAGCATGTTTTCACATAACGTTAAGGAGACCGATTTGTCTACCATAAACATCATAGACATGTCAATTCAAGCTTGTCAGACATTTATAAATTTTCTTTATGGAACCGTCAATGATGAAGAATTTCTAATGCATAGACTAGACCTATTGCACGCCGCTGACAAGTATGATATCTATGACTTAAGAGAGGCGTGTCAAAAGAGTCTTCAAGAAGATATTAACGTGAAAAATGTACTCAAGAGACTTCAAATTGCATCTCTGTATCAATTATCAAAGCTGAAGATTAGTTGTATGCAGTATCTTGTGAAATTTGGTAAAATATATGATATTCAAGATGATTTAACTGATTTCTTGCAAACCGCAGATCGAGATTTAATATGTGAAGTCTTTCATGAAATTCTTGATGAATGGAAAAAGTAA 870 0.3609 MKSRHLSVEKICGLRVELYPEMSKDNSPIASFAIRVLSCAGNTKILTQSEIKDKLLSNKDGFVWEIEVPLPGKFIIDIEFLDLKTTCPNGGEACSIWPNGFTKQRQNAAALESLGRMNKEGIYTDITINVNSEGSIRAHRAVLASQSPVFRSMFSHNVKETDLSTINIIDMSIQACQTFINFLYGTVNDEEFLMHRLDLLHAADKYDIYDLREACQKSLQEDINVKNVLKRLQIASLYQLSKLKISCMQYLVKFGKIYDIQDDLTDFLQTADRDLICEVFHEILDEWKK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0175 289 SUPERFAMILY POZ domain 109 221 IPR011333 -
Mal8g0175 289 ProSiteProfiles BTB domain profile. 124 184 IPR000210 GO:0005515
Mal8g0175 289 SMART BTB_4 124 223 IPR000210 GO:0005515
Mal8g0175 289 Pfam BTB/POZ domain 116 221 IPR000210 GO:0005515
Mal8g0175 289 PANTHER OS08G0495500 PROTEIN-RELATED 4 288 IPR044714 -
Mal8g0175 289 PANTHER OS08G0495500 PROTEIN 4 288 - -
Mal8g0175 289 Gene3D Potassium Channel Kv1.1; Chain A 101 253 IPR011333 -
Mal8g0175 289 CDD BTB_POZ_ZBTB_KLHL-like 123 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0175 Mal-Chr8 2838809 2840188 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal8g0175 BTB 3.5e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0175 K10523 - gmx:100790186 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0175 8 2838809 2840188 Mal8g0175 8 2838809 2840188 ECH