Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0105 ATGAGTTTCATAGAGAAGAATTTATCTTATATACACAGTGAGATTAGTCTATACAATAATGATGAAGAAAAGTTGGTAAATTTTTCAAGGATGTCTGTGACTGTGAATGGAAGAGTTTCTGGTTCAAATGGAAGATGTTCATCACCAAAAATCAAGTCTTGGAAAGGAAATGAGTTTTTGCATGTTCTTAATTCTACTAGGACTAGGACATGTAGGTGGAAACAGTTTCTCTTTTGGGTTTTTGGTGGTGTTGTTGCTATAGGGAGTGTTTGGTTTATGTTTAGTAGTTTCAATACTAAGAATTTGACTAAAGAAACAGCTTGTGAAAAGAGTACACAAACCTTGTTACAACGTTACAATGTCAGTAGGAAACAGCTTCATGCTTTGGCTTCCTTGTTCTCTGGATCAGATCAGATTTTGTCCAATTGCATTGATGAAAGGAGACTTCAAATGTTGTTAAGCAGTGGCATAGTCAATACTCCACAGTTAATGTGTCCAAAGAATCAGGAGTTACAAAAGGAGCATAGATATGTTGCAGAATCTATAGAACAATGCCAAATTCTTGATGTTTTATCATTCCCTTGTAAAACATATGTAACATCAGGCTCTGCACTTTTGTCCAATTTGGTTAACGTTTTGCTCCGTGGAAAGGTGATGAGAGTGTGCGCAATTGAGGATAATGTTAATTTATCTAGTTTAATTAAAGGATGTTGTTGGGTTCTTATTGGAACTATACTGTCCCACAAGTTGTTTGGCTTCTGTTTACTAAGGAAGAATCAAAAGCAGAAGAAGGTAGTTAAGGAGCATCCAGCTGCTCCACAAAAGCGGATTCAACATTCTATGCACGGTCATTCAAAGGCTGCTGGTTGGTGGAGAAAGAAGTTGTTAGTTATTTTTGTGTCACTTGGAATCGTTGGTTCCGCATGGTTATTTATGCACATGAGTTCAGACATTGCGCAAAGAAGAGAAGATATGCTTGCCACTATGTGTGATGAGAGAGCCCGTATGCTGCAAGATCAATTTAACGTGAGCATGAACCATGTACATGCTCTTGCTATTCTTGTTTCTACATTTCACCATGGTAAACACCCTTCTGCAGTTGACCAGAAATTATTTGGAGAATATACAGAGAGTTCAGCATTTGAGAGACCTCTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGCATTTTGAGAAGCAGCATGGTTGGACAATTAAGAAAATGGAAACTGAGAACGAGGCATTAGTTCAAGATTGTATTCCAGAAAACTTGGATCCGGCGCCCATTCAAGATGAATATGCACCAGTCATATTTGCTCAAGAAACAGTTTCTCATATTGTATCCATCGACATGATGTCAGGGAAGGAGGATCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTCCAATTACCTCGGTGTTGTACTTACCTTTGCTGTCTATAACTCTAAGCTTCCTCCAGATGCTACACCCGAACAGCGTATTGAAGCTACTGTGGGGTATCTCGGTGCGTCTTATGATGTTCCGTCACTGGTGGACAAGCTTCTTCACCAGCTTGCCAGCAAGCAAACCATTGCTGTCAATGTCTATGATACAACTAATGCATCTGATCCTATTACAATGTATGGTACCGATGTTCTTGATACTGGCTTACTACACATAAGCGGTCTAGATTTTGGGGATCCGCTACGAAAACATGAGATGCACTGCAGGTTCAAGCATATGCCTCCGTTTCCTTGGACGGCATTCAATGCATCTGTGGGCGTATTTGTCATTACCTTGCTTCTGGGACATATATTTCATGCAGCAATAAATCGAATAGCTAAAGTGGAGGACGACTATCGTCAAATGAGAGAGCTGAAAGTTCTCGCTGAAGCTGCAGATGTCGCAAAATCTCAGTTTCTTGCGACAGTTTCACACGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGACCTTGATAACAATCAGATGGATTTTGCCCAAACTGCTCACACGAGTGGTGAAGATCTTATATCAGTCATAAACGAGGTTCTCTATCAAGCTAAGATCGAGGCAGGCAAACTTGAACTTGAAGCTGTAGCTTTTCATCCACATGCTATTCTAGATGAAGTTCTATCACACTTCTCTGAAAAGTCCAAAGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAGTCAAGTACCTCAAGTTGTCATTGGCGATCCTAAACGCTTCCGGCAAATAATTTCCAATCTTGTAGGAAATTCACTTAAGTTCACTCACGATAAAGGACATGTATTTGTCTCGATTCATCTGGCAAAGGAAGTGAAGAATCCACTTCATATCATGGATGTAGTGCTGAGAGAAGGCTTAAATTTGGATCAAGACACATCAGGAAAAACATGGAATACATTGAGTGGATTTCCTGTAGGCAACAGATGGAAGAGCTGGGAAAATTTTAAAAAGTTAAATTTGACGGATGAATTTGAAACCATTCAACTACTAGTAACTGTTGAGGACACCGGTATAGGAATTCCTACTGATGCACAAAGCCGCATATTTACACCTTTCATGCAGGCTGATAGTTCCACATCTCGAACATACGGTGGAACTGGAATAGGATTAAGCATTAGCAAATGTCTAGTTGAACTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATTGGAAGTACTTTTTCATTTACTGGAAATTTCAGAAAAGAAAAAACCAACTCTCTGGATGAAAAGTGGCAGCAGAAGTGCAATCCTTTTGTCTCCGAGTTCCAAGGATTGAGAGCATTAGTGATAGATAGAAAAAACATCCGAGCTGAGGTTACACGATATCAGCTGCAAAGGTTGGGAATGTCTGTGGATGTAAGTTCCAGTCTTAAATCTGCATGCTTTTGTCTATCCGATACTTGCAGCACAAGTATGTCAATGCAGTTGGCCATGATTCTCATAGACAAGGATTATTGGGATAAGGAAAGTAGTTGCTTAAGCGAAATCAAGAATCGTAAACAGAATGGCATCGAAGGGGACTCGATGAACTTTCCAAAGATTTTTCTCCTGGCCACCCACTTTAGTCCTAGTGAGCGCAACGAGCTGAAGTCAGTTGGTATAATAGATGATATACTAATGAAGCCTCTCTGGCCAAGTCTTTTGATTCGCTGCTACAGAGAATCCCTTGGAACTGGGAGAAAACAAATTAATAGAAAGCAAGTATACAAACTTGGAGATGTATTAATACACAAACGAATTTTGGTGGTTGATGATAATGCGGTGAACAGAAAAGTTGCAGAAGGTGTCCTGCGTAAATATGGGGCAGCAGTTACCTGTGTTGAAGGCGGTAAGGATGCTCTAAAGATACTTAAACCACCGCATAATTTTGATGCTTGCTTCATGGATCTCCAAATGCCGGAAATGGATGGTTTTGAGGTGACGAGGCGAATCCGGTATATGGAGAACGAAGTAAATGAAAAAATTGCATGTGGGGAAGAATTGGCAGAGATGTTTGGTAACATTTCTTATTGGCACATACCAATACTAGCTATGACAGCTGATATAACTCAGGCATCAAATGAAGAATGCAAAAAATGTGGGATGGATGACTATGTGTCGAAGCCATTTGAAGAAGAGAAACTCTATATGGCAGTGGCACGTGTCTTCAATTTTGGTTCATAG 3747 0.4006 MSFIEKNLSYIHSEISLYNNDEEKLVNFSRMSVTVNGRVSGSNGRCSSPKIKSWKGNEFLHVLNSTRTRTCRWKQFLFWVFGGVVAIGSVWFMFSSFNTKNLTKETACEKSTQTLLQRYNVSRKQLHALASLFSGSDQILSNCIDERRLQMLLSSGIVNTPQLMCPKNQELQKEHRYVAESIEQCQILDVLSFPCKTYVTSGSALLSNLVNVLLRGKVMRVCAIEDNVNLSSLIKGCCWVLIGTILSHKLFGFCLLRKNQKQKKVVKEHPAAPQKRIQHSMHGHSKAAGWWRKKLLVIFVSLGIVGSAWLFMHMSSDIAQRREDMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKLFGEYTESSAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNYLGVVLTFAVYNSKLPPDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIAVNVYDTTNASDPITMYGTDVLDTGLLHISGLDFGDPLRKHEMHCRFKHMPPFPWTAFNASVGVFVITLLLGHIFHAAINRIAKVEDDYRQMRELKVLAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDNNQMDFAQTAHTSGEDLISVINEVLYQAKIEAGKLELEAVAFHPHAILDEVLSHFSEKSKEKGIELAVYASSQVPQVVIGDPKRFRQIISNLVGNSLKFTHDKGHVFVSIHLAKEVKNPLHIMDVVLREGLNLDQDTSGKTWNTLSGFPVGNRWKSWENFKKLNLTDEFETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVELMGGEIGFVSEPEIGSTFSFTGNFRKEKTNSLDEKWQQKCNPFVSEFQGLRALVIDRKNIRAEVTRYQLQRLGMSVDVSSSLKSACFCLSDTCSTSMSMQLAMILIDKDYWDKESSCLSEIKNRKQNGIEGDSMNFPKIFLLATHFSPSERNELKSVGIIDDILMKPLWPSLLIRCYRESLGTGRKQINRKQVYKLGDVLIHKRILVVDDNAVNRKVAEGVLRKYGAAVTCVEGGKDALKILKPPHNFDACFMDLQMPEMDGFEVTRRIRYMENEVNEKIACGEELAEMFGNISYWHIPILAMTADITQASNEECKKCGMDDYVSKPFEEEKLYMAVARVFNFGS* 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0105 1248 Gene3D - 712 932 IPR036890 -
Mal8g0105 1248 CDD REC_hyHK_CKI1_RcsC-like 1108 1240 - -
Mal8g0105 1248 SMART CHASE_2 363 562 IPR006189 -
Mal8g0105 1248 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 760 924 IPR003594 -
Mal8g0105 1248 Pfam His Kinase A (phospho-acceptor) domain 648 713 IPR003661 GO:0000155|GO:0007165
Mal8g0105 1248 SMART HisKA_10 648 713 IPR003661 GO:0000155|GO:0007165
Mal8g0105 1248 CDD HATPase_EvgS-ArcB-TorS-like 765 924 - -
Mal8g0105 1248 ProSiteProfiles Response regulatory domain profile. 954 1084 IPR001789 GO:0000160
Mal8g0105 1248 PRINTS Bacterial sensor protein C-terminal signature 872 882 IPR004358 GO:0016310|GO:0016772
Mal8g0105 1248 PRINTS Bacterial sensor protein C-terminal signature 889 907 IPR004358 GO:0016310|GO:0016772
Mal8g0105 1248 PRINTS Bacterial sensor protein C-terminal signature 854 868 IPR004358 GO:0016310|GO:0016772
Mal8g0105 1248 PANTHER TWO-COMPONENT HISTIDINE KINASE 278 1245 - -
Mal8g0105 1248 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 702 924 IPR036890 -
Mal8g0105 1248 ProSiteProfiles Response regulatory domain profile. 1107 1244 IPR001789 GO:0000160
Mal8g0105 1248 CDD HisKA 648 709 IPR003661 GO:0000155|GO:0007165
Mal8g0105 1248 Gene3D CHASE domain 367 593 IPR042240 -
Mal8g0105 1248 ProSiteProfiles CHASE domain profile. 363 587 IPR006189 -
Mal8g0105 1248 SMART REC_2 1106 1240 IPR001789 GO:0000160
Mal8g0105 1248 Gene3D - 97 136 - -
Mal8g0105 1248 Gene3D - 314 366 - -
Mal8g0105 1248 ProSiteProfiles Histidine kinase domain profile. 655 929 IPR005467 -
Mal8g0105 1248 Pfam CHASE domain 366 560 IPR006189 -
Mal8g0105 1248 Gene3D - 616 711 - -
Mal8g0105 1248 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 638 714 IPR036097 GO:0000155|GO:0007165
Mal8g0105 1248 PANTHER HISTIDINE KINASE 2 278 1245 - -
Mal8g0105 1248 SUPERFAMILY CheY-like 1106 1245 IPR011006 -
Mal8g0105 1248 SMART HKATPase_4 760 929 IPR003594 -
Mal8g0105 1248 Gene3D - 1102 1246 - -
Mal8g0105 1248 SUPERFAMILY CheY-like 949 1084 IPR011006 -
Mal8g0105 1248 Pfam Response regulator receiver domain 1108 1240 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0105 Mal-Chr8 1817937 1825293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0105 76 1244 Miscellaneous Gene Families AT5G35750 59.779 0.0 1351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal8g0105 CHASE 3.5e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0105 K14489 - gmx:100805107 1827.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0105 8 1817937 1825293 Mal8g0105 8 1817937 1825293 ECH