Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0102 ATGTACTTTTCCAAAAGCTCCAAGGAGCATTGTCTTTCATTTCATATATACTCTGCTGCTGCTGCTGCTCAGAACCAACCAACCATGACTTCCAGATTCTTTTACCAGGGTGGTGATCCTAGTGATAGTGACGACGATGAACCTACTGATATTGACGATGAACCCAGTGATACTGATCAACCACTTCAATCAGATCCAGCCGATAAAAGCAAATACTACGTTGATGGTAATGCAGATGACAGTGACGATGATGATCGCCGAAAGCGTTTTATTAAGCCTACTATAGATAAGCGTTTTGATGAGATGACTTCCACCGTTGATCAGATCAAGAATGCCATCAAGATTAATGATTGGGTCAGCCTTCAAGAGAGTTTTGACAAGATCAACAAACAACTTGACAAAGTCATGCGTGTTATCGAGTCTCAAAAGCTCCCCAATCTTTATATCAAGGCTCTTGTAATGCTTGAAGATTTCCTTGCTCAGTCTTTGGCCAATAAGGATGCCAAAAAGAAGATGAGTAGCAGCAATGCCAAGGCCTTCAACTCAATGAAGCAGAAATTGAAAAAGAACAATAAGCAATATGAGGACTTGATTAACAAATGCAGGGAGAATCCTGAGGAGAGTGAGGGCGAAAAGGATGATGTGGACGACGACGACGACTCTGACGACGGTGAGATTATCGAACCTGATCAGCTCAGGAAGCCGGACCCCATATCAGATTCTGAAACTTCTCAGCAGGGTGATGATGATGGCAAGCCTAATGCTGATGGTGAAGCACCTTGGGATCAAAAACTTAACAAGAGAGATAGGCTTTTAGAGAAACAGTTCATGAAAAACCCTAGTGAGATCACATGGGACACTGTTAACAAGAAATTCAAAGAGATTCTGGAAGCCAGGGGCAGGAAGGGAACTGGAAGGTTTGAACAGGTTGAGCAGCTTACCTTCCTTACAAAAGTTGCTAAAACACCTGCACAGAAACTGCAAATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTCAGTGGGCATATGCCAATAAATGTGTGGAAAAAGTGTGTGCAGAACATGCTGGTCATTCTGGATATTCTCGTGCAGCACCCAAACATTAAGGTTGATGATTCGGTGGAGCTAGATGAGAATGAAACTAAGAAAGGGGCTGACTATAACGGACCCATTCATGTCTGGGGCAACTTAGTTGCTTTCTTAGAAAAAATAGATGCTGAGTTTTTCAAGAGCCTGCAATGCATAGATCCCCACACCCGTGAATATGTTGAGAGGCTCAGGGATGAGCCCGTGTTTGTTGTTCTTGCCCAGAATGTCCAGGAATATCTTGAAAATATTGGAGATTTCAAAGCTTCTTCTAAGGTGGCCTTAAAGAGGGTTGAACTCATTTACTACAAACCACAAGAGGTTTATGAGGCAACCAGGAAATTGGCTGAGATGACCGAAGATGGAGATAATGGAGACGAGGCGAGCGAGGAGTCAAAAGGTTTTGTGGATACGAGAATTCCCGCTCCATTTGTTGTTACTCCGGAACTTGTGGCGCGGAAACCCACCTTCCCGGAGAATAGCAGGACCTTAATGGATGTGTTAGTATCACTAATATACAAATATGGAGACGAGCGCACTAAAGCACGCGCAATGCTTTGTGATATATATCACCATGCTCTTCTTGATGAGTTTGCAGTAGCCCGTGATCTGTTGCTTATGAGTCATTTGCAAGAAAATGTTCACCACATGGACATTTCGACACAGATACTTTTTAACAGGGCTATGTCACAGTTAGGTCTATGTGCTTTTCGGGTTGGGCTGGTTTCTGAAGCACATGGCTGTTTGTCTGAACTTTATTCTGGTGGACGGGTGAAAGAATTGCTTGCACAAGGAGTTTCACAGAGTCGTTATCATGAAAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCATATAAATCTTGAGCTCCTGGAATCAGTGCATCTTACATCTGCTATGCTGCTGGAAGTTCCCAACATGGCAGCCAATGTTCATGATGCAAAGCGTAAAATCATCAGTAAGAATTTCCGCCGCTTGCTTGAGGTCAGTGAGAAACAAACATTCACCGGTCCTCCTGAAACTGTCAGGGATCATGTTATGGCTGCCACAAGGGTTCTTATTAATGGAGATTTCCATAAGGCCTTTGACATTATTGCATCTCTTGACGTATGGAAATTTGTGAAAAATCGGGATGCCGTGCTAGAAATGCTGAAGGACAAAATCAAGGAGGAGGCACTTAGGACATACCTATTTACCTTCTCTTCATCATACGATTCTCTGAGCGTGGATCAGCTCACAAATTTTTTCGGTCTCTCTCTTCCTTGTGTTCATAGTATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGATCAGCCATCTGGGTGCATTATTTTCAGAAATGTTGAACACTCAAGGGTGCAGGCTTTGGCATTCCAGTTAACTCAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCTACAGAAGCAAGGTTAGGCGGCGGTGGGTTGGATCTGCCTCCAAGGCGGAGGGATGGGCAGGATTATGCTGCTGCAGCTGGTAGTGGAACGTCTTTGGGTGGCAGGTGGCAAGACTTGTCCTATTCTCAAACAAGGCAAGGCAGTGGACGTGCAGGATCTGGTGGAAGGGCATTATCATTTGGTCAAACTGGTGGGAGTGGCGGCTATTCAAGAGGACGGGGAACTGGTGGAGGTGGATATCAGAATTCAGGGAGGACTCATGGGGGTTCAGCACTGAGGGGACCCCACGGAGATACTTCTACCCGCATGGTTAGCCTTAGGGGAGTTCGTGCTTGA 2892 0.4461 MYFSKSSKEHCLSFHIYSAAAAAQNQPTMTSRFFYQGGDPSDSDDDEPTDIDDEPSDTDQPLQSDPADKSKYYVDGNADDSDDDDRRKRFIKPTIDKRFDEMTSTVDQIKNAIKINDWVSLQESFDKINKQLDKVMRVIESQKLPNLYIKALVMLEDFLAQSLANKDAKKKMSSSNAKAFNSMKQKLKKNNKQYEDLINKCRENPEESEGEKDDVDDDDDSDDGEIIEPDQLRKPDPISDSETSQQGDDDGKPNADGEAPWDQKLNKRDRLLEKQFMKNPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGADYNGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPVFVVLAQNVQEYLENIGDFKASSKVALKRVELIYYKPQEVYEATRKLAEMTEDGDNGDEASEESKGFVDTRIPAPFVVTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLLLMSHLQENVHHMDISTQILFNRAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKIISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFHKAFDIIASLDVWKFVKNRDAVLEMLKDKIKEEALRTYLFTFSSSYDSLSVDQLTNFFGLSLPCVHSIVSRMMINEELHASWDQPSGCIIFRNVEHSRVQALAFQLTQKLSILAESNERATEARLGGGGLDLPPRRRDGQDYAAAAGSGTSLGGRWQDLSYSQTRQGSGRAGSGGRALSFGQTGGSGGYSRGRGTGGGGYQNSGRTHGGSALRGPHGDTSTRMVSLRGVRA* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0102 963 Coils Coil 177 204 - -
Mal8g0102 963 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 757 845 - -
Mal8g0102 963 MobiDBLite consensus disorder prediction 894 963 - -
Mal8g0102 963 ProSiteProfiles PCI domain profile. 656 828 IPR000717 -
Mal8g0102 963 MobiDBLite consensus disorder prediction 166 186 - -
Mal8g0102 963 MobiDBLite consensus disorder prediction 202 265 - -
Mal8g0102 963 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 29 962 - -
Mal8g0102 963 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 73 688 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mal8g0102 963 SMART PINT_4 757 845 IPR000717 -
Mal8g0102 963 MobiDBLite consensus disorder prediction 40 59 - -
Mal8g0102 963 MobiDBLite consensus disorder prediction 245 265 - -
Mal8g0102 963 MobiDBLite consensus disorder prediction 72 86 - -
Mal8g0102 963 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 30 924 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mal8g0102 963 MobiDBLite consensus disorder prediction 167 186 - -
Mal8g0102 963 SUPERFAMILY "Winged helix" DNA-binding domain 752 827 IPR036390 -
Mal8g0102 963 Pfam PCI domain 696 824 IPR000717 -
Mal8g0102 963 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 29 962 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mal8g0102 963 MobiDBLite consensus disorder prediction 209 226 - -
Mal8g0102 963 MobiDBLite consensus disorder prediction 30 86 - -
Mal8g0102 963 MobiDBLite consensus disorder prediction 856 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0102 Mal-Chr8 1794849 1803563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0102 29 963 Eukaryotic Initiation Factors Gene Family AT3G56150 64.947 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0102 K03252 - gmx:100781967 1375.15