Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0097 ATGGTTTCGTCAAAAGAAATTGTCGATCTCAATGTTTCTCACGATGAAGTACAACAACGAGTGAGTCCTCAGAGGGAGATCACATTGTCACAAAGGATTGACGATGTAGCTAACAATGAATTATCAAATTCCGATGCTATGGCTTGTGAATTGGTATCATCACACTCTTCAACACCCAGACAACATTCACAAAGCCCCAATACTCCTTCACATGAATTGTCTCTGATGCAATCTAATCAGTACACTCGCTCTATCATACGTGAAAAGGTAAGAAAAGATGGATATAAGTGGCTAAAGTATGGCCAGAAAATCATTAAGAAGAATCCACAACATAAAAGGGGATATTACAAATGCACACATTCAAATTGCAAGGCAGGAAAGAAATTTCATTGGTCGGATGATGGAAACATCGAATATTTCACTTACACCAGTCAACATAATCATCCTAATCCTCAATTAAGCACTGTACCACAAGTTGACCGTGTTCTTCCTGTTGTTGAACACGTACAACATCAACTTTCTATGGTCGATGTGGAAATTCAAGACAACAATAACACTGATGCTACTCGAGCTGGTGCGTTAACTAGTGAATCTCGCCTTGTTGTTCAGACTTCAAGTGCAAATGATGTTGTAAATGATGTGTATCGTTGGCACATGTACGGGAAAAAAATTATTAAAGGGAAGACAATTCAAAGATTAAATGAACATGGTACTCCTAGTACAAAATCTGATGCAAAACTTGATCACATCAAACTCAAATAG 762 0.378 MVSSKEIVDLNVSHDEVQQRVSPQREITLSQRIDDVANNELSNSDAMACELVSSHSSTPRQHSQSPNTPSHELSLMQSNQYTRSIIREKVRKDGYKWLKYGQKIIKKNPQHKRGYYKCTHSNCKAGKKFHWSDDGNIEYFTYTSQHNHPNPQLSTVPQVDRVLPVVEHVQHQLSMVDVEIQDNNNTDATRAGALTSESRLVVQTSSANDVVNDVYRWHMYGKKIIKGKTIQRLNEHGTPSTKSDAKLDHIKLK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0097 253 PANTHER WRKY TRANSCRIPTION FACTOR 1 183 232 - -
Mal8g0097 253 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 183 - -
Mal8g0097 253 MobiDBLite consensus disorder prediction 234 253 - -
Mal8g0097 253 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 SUPERFAMILY WRKY DNA-binding domain 86 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 Gene3D WRKY domain 198 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 MobiDBLite consensus disorder prediction 239 253 - -
Mal8g0097 253 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 183 232 IPR044810 GO:0003700
Mal8g0097 253 MobiDBLite consensus disorder prediction 51 75 - -
Mal8g0097 253 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 Gene3D WRKY domain 77 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 ProSiteProfiles WRKY domain profile. 206 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0097 253 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 183 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0097 Mal-Chr8 1740771 1742121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0097 70 242 WRKY Transcription Factor Family AT2G04880 31.304 4.16e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g0097 WRKY 4e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0097 - K18834 gmx:100782726 179.874