Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0061 ATGACAAACGTAACGCAACAATACAAAGCGTTGCTAAAGAAAAACATATTACTTTCATGGCGAAGCAAAAGATCAATCCTTCTCCAACTCCTGTCACCATTTTTTTTCATTTTCCTAATGTTCGCCATAGACAAGGCAATGAAAGCAAAAAATTCAGCATCACCCGAATACAAAATCGTCACAAACCCTCCTTCAATCCCACCTCCACCAATCCCACCTTGTGAGAAAAAATTCTTCATCAAGAAACCTTGTTATGATTTTATATGGAGTGGTGATGATAATCCAAAGTTTCATACAATTGTGGATAGGATAATTAAGAATAATGATGGCAGGGTTATACCAGGGTATAAGGTTAAGAGTTTTCGTAATAAAGATGAAGTTGATGATTGGTTGTTTAAGAATCCTATGAAATGTCCTTCTGCTATTCATTTTGGTGAAAAGAAAGGGGGTGTTATTAGTTATGGGATGCAAACTAATACCACCATGGTTCAGAAACATGGGAATATTGAAGATCCTACTTTTGATTTTCAGTTACCTCTTCAGCTTGCTGCTGAACGTGAAATCGCTAGGTTTCTTATTGGAGACCCAGACTTCAAGTGGAATGTGTTTTTCAGGGAATTCCCGCACCCAGCAAGTACTCTTCCTTTCTCTACAGTTGGAACAATAGGTCCATCATTTTTTCTAGCAATTGCTATGTTTAATTTTGTTCTTCAGATGAGTTCTTTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCTTGATGGGGCTTTACGACTCTGCGTACTGGTTATCATGGCTAACTTGGGAAACAGTCGTTACACTAATATCATCTATTCTCTTAGTTCTCAGTGGCATGATGTTTCAGATGAGTTTCTTCTTGAAAAACAGTTTCGCTGTTCTCTTCTTTTTGTTCTTCCTATTTCAACTCAGCATGACTGGGTTAGCCTTCTTCTTATCGGCTTTCATTCGTAAATCATCTTCGGCAACAACAGTCGGCTTCTCCATATTTATCGTCAGTTTCTTGAGTCAGACCGCGGCACAAATAGGATTTCCTTACAATTCCAACTTTAAAAAGTTTGCTACTATCCGAAATATATCGCCATTGTTTCCGCCCAATCTTTTTGCGTACGGCCTGAAACTGCTATCTGATGCAGTTGCAACCCCTGAAGATAATGGTGTTAGCTGGAGTACACGGGGAAAGTGCGCCGTTAACGATGATGGCTGCATGATGACAATGAATAATATTTATAAATGGCTTGCGGCCACATTCTTTCTATGGTTCGTTCTGGCCATCTACTTTGACAATATAATCCCAAATGCAATGGGTGTGAGGAAATCTGTGTTATACTTTCTAAATCCTCATTATTGGACAGGAAACGGAGGACAAAAAGTGAAAGAGGGTGGGGTTTGTAGTTGCATATTTTCAACCGGACATGAAGAGATTAATAGTACACCAGATGATGAAGATGTCCTTGAAGAAGAAAATGTTGTGAAGCAGCAACTAACACAAGGTGTCATTGATGCAAATGTTGCTGTTCAGGTACATGGCATTGTGAAGACTTACCCCGGTACATTAAACATTGGTTGCTGCTGCTGTAAACGTAAAGGAACTGCTCCTTACCATGCTCTTAAGGGCTTGTGGGTGAACTTTCCAAAGGATCAGTTATTTTGTCTATTAGGACCCAATGGAGCGGGAAAAACTACAGCTATTAATTGTTTGACTGGGATAACTCCAATAACAGATGGAGATGCATTGATTTATGGACAGTCGGTCCGAAGCTCCACTGGCATGTCAAACATTCGAAAGCTTATAGGAGTGTGTCCCCAGTTTGATATCCTATGGGAGGCTTTGTCTGGTCAAGAACACCTCGAACTCTTCGCTAGTATTAAAGGGATGTCCCCAGCTTCTATAAAATCAACTACACAAACATCATTGGCAGAGGTGAGACTCCTGGATGCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTCAGTGTTGCAATTGCACTTATTGGTGACCCCAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATTACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTCACTACACATTCAATGGAAGAAGCTGATATTCTAAGCGATCGTATAGGAATAATGGCAAAGGGAAAGCTGCGCTGCATAGGAACCTCAATCAGATTGAAGTCACGTTTCGGTACTGGTTTTATTACTAATATTAGCTTCAATGGAAACAACAATGATCACAGTCCTGTAAATGGTGACACAGTATCAGCAAGACATCGTGAGGCTGTGAAGCAATTCTTTAAGAATCGTTTAGATGTAGAACCAAAAGAGGAGAACAATAACGTCCTAACTTATGTGATTCCTCATGAAAAAGAGGCACTCCTTACAAATTTCTTTTCAGAGCTCCAAGATCGAGAAGGAGAATTTGGTATATCTGACATCCAGCTTGGTCTAACAACTCTCGAAGAAGTGTTCTTGAATATTGCAAAGAAAGCAGAGCTAGAAACTGCTGCAGCTGAAGGGAGCCTAGTGACTTTGACCTTGACATCTGGAGAGTCTGTCCAGATTCCTGTAGGAGCAATTTATGTGGGAATTCCAGGATCACAGTGTTCTGAATACCCCACAGGTTTTATGGTAGAAGTATATTGGGATCAAGATGACACCGGTGCCCTATGTATTGCCGGCCACTCGCAGGAAGCTCCTATTCCTGAAAATATCCAACTACCATATTCTACTACAAAACAACTCAAGTCAGGGTCAGTTCATGGAGTTGTTATTGATGCAAGTCAAGTTAGTTCAGTCAATTTTCACTGA 2883 0.4062 MTNVTQQYKALLKKNILLSWRSKRSILLQLLSPFFFIFLMFAIDKAMKAKNSASPEYKIVTNPPSIPPPPIPPCEKKFFIKKPCYDFIWSGDDNPKFHTIVDRIIKNNDGRVIPGYKVKSFRNKDEVDDWLFKNPMKCPSAIHFGEKKGGVISYGMQTNTTMVQKHGNIEDPTFDFQLPLQLAAEREIARFLIGDPDFKWNVFFREFPHPASTLPFSTVGTIGPSFFLAIAMFNFVLQMSSLVTEKELKLRQAMTLMGLYDSAYWLSWLTWETVVTLISSILLVLSGMMFQMSFFLKNSFAVLFFLFFLFQLSMTGLAFFLSAFIRKSSSATTVGFSIFIVSFLSQTAAQIGFPYNSNFKKFATIRNISPLFPPNLFAYGLKLLSDAVATPEDNGVSWSTRGKCAVNDDGCMMTMNNIYKWLAATFFLWFVLAIYFDNIIPNAMGVRKSVLYFLNPHYWTGNGGQKVKEGGVCSCIFSTGHEEINSTPDDEDVLEEENVVKQQLTQGVIDANVAVQVHGIVKTYPGTLNIGCCCCKRKGTAPYHALKGLWVNFPKDQLFCLLGPNGAGKTTAINCLTGITPITDGDALIYGQSVRSSTGMSNIRKLIGVCPQFDILWEALSGQEHLELFASIKGMSPASIKSTTQTSLAEVRLLDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFITNISFNGNNNDHSPVNGDTVSARHREAVKQFFKNRLDVEPKEENNNVLTYVIPHEKEALLTNFFSELQDREGEFGISDIQLGLTTLEEVFLNIAKKAELETAAAEGSLVTLTLTSGESVQIPVGAIYVGIPGSQCSEYPTGFMVEVYWDQDDTGALCIAGHSQEAPIPENIQLPYSTTKQLKSGSVHGVVIDASQVSSVNFH* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0061 960 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524
Mal8g0061 960 Gene3D - 517 761 IPR027417 -
Mal8g0061 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 542 744 IPR027417 -
Mal8g0061 960 CDD ABC_subfamily_A 515 750 - -
Mal8g0061 960 PANTHER ABC TRANSPORTER A FAMILY MEMBER 1-RELATED 4 932 - -
Mal8g0061 960 Pfam ABC-2 family transporter protein 219 435 - -
Mal8g0061 960 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 4 932 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal8g0061 960 Pfam ABC transporter 547 691 IPR003439 GO:0005524
Mal8g0061 960 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 515 762 IPR003439 GO:0005524
Mal8g0061 960 SMART AAA_5 555 739 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0061 Mal-Chr8 1208397 1213946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0061 546 781 Calmodulin-binding Proteins AT2G36910 22.951 3.17e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0061 - - gmx:100786538 1440.25