Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0045 ATGCAAATAGATAGCTACGGCAAACAACAGCTTCATACTGTTTCATTGCTAAGATGTAGCATGTCAGTAAACTTGATATACAAAGGAACCATTAATCTTTCGCCATATCAGGAATTTAAGGGCTATGTTTTCAAGATAACTGGTGGGTGTGACAATCAAGGATTCCCAGTGAAGCAGGGAGTGTTGACACCTGGTCGTGTTCGATTCTTGCTTCACAGAGGAACTCCTTGTTTCCGTGGACATGGAAGGCGCAATGGAGAGCGTAGAAGGAAGTCTGTTCGTGGATGCATTGTCAGCCCCGACCTCTCTGTTTTGAATTTGGTAATTGTGAAGAATGGTGACAATGATTTACCTGGTCTTACTGATGTTGAGAAGCCAAGGATGAGAGGACCAAAGAGAGCATCCAAGATCCGAAAGCTGTTTAACCTGTCAAAGGACGACGATGTGCGAAAACATGTCAACACCCCGTCGCAATTTCAAAAACCAAAGATGGGAAGAAGGTTAGCAAAGCTCTCAAGATTCAGCGACTGGTCACTCCTTTGA 543 0.4401 MQIDSYGKQQLHTVSLLRCSMSVNLIYKGTINLSPYQEFKGYVFKITGGCDNQGFPVKQGVLTPGRVRFLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKNGDNDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKHVNTPSQFQKPKMGRRLAKLSRFSDWSLL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0045 180 Pfam Ribosomal protein S6e 37 122 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal8g0045 180 SMART Ribosomal_S6e_2 1 122 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal8g0045 180 Gene3D - 127 175 - -
Mal8g0045 180 PANTHER 40S RIBOSOMAL PROTEIN S6 34 172 - -
Mal8g0045 180 PANTHER 40S RIBOSOMAL PROTEIN S6 34 172 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0045 Mal-Chr8 942735 945923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0045 57 170 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 80.702 8.64e-62 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0045 K02991 - egt:105961129 223.787