Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0026 ATGGTCACACCAAGCGGCATCTCCAAATTGCTTGCAAATAGATCGATTGATTCTTCATCAATTATTATTCCTGAAATTGTCGATCTCCAACAAAGCGGCAACAGATACTTGTTTTCTGGGAACGATGGGGAAACGAAACTAACCGCAATCATTCCAAAGAGTAAATTTGATGCTAAGCCCTTAAACGTTTATTCAAGAAGAAGAAAAAGAAGAAAAAGTCAACTGGTGCTATTGTTGTTTTTGCCTGAAGAAATCATTGTCAACATCCTCCTCAGACTTCCGGTGAGAACCCTTCTTCAATTTAAATGTGTGTGTAAATCTTGGAAAACCCTAATTTCAGATCCCCGTTTCGCAAAGAACCAAATTCTGACTTCAACTGTTAAACCTGTTAATCCCGTTATCTTTAGCTCGACATGTGAGACAACTATTCTAGGTTCATGCAATGGTTTGCTCTGTTTGTATGAAAACTCTCACTTCAGATTATGGAATCCAAAAAATCTCCCACCATTGTTTGTTTTGAACATCATATTCTCACATTTCTGGTTAGGCAAATTTGTGAGTGGCACATTGAATTGGATTGTTAATAAAGATTTTAATTCCATCAAGCAAGATGTGATTGTATCTTTTGATGTTGAGAAGCAGATTTATGAGGAAATGTTGCTACCCCAACATGATGGTGACAATGTTCGCAATCTTGTGTTGCATGTTTTGAGTAATTGCATTTGCGTGTCTTTTGATCACCCTAAGGAAAGTCATTGGGTTGTATGGATAATGAAAAATTATGGAGTTGTTGAATCATGGACTAAATTGAAAATGATCCCTCAAAATAAGTTAACCCCAGATATCCGTAGGTGTCCTTCGTTTGATACCTTGTTTATTTTAGAAAATTGTGTTATTCTCTTCAGACTGAAGAATGGTAAGCTTGTTGTGTATAACTTGAATAATAATGGTAGATTGAATTATCAGAAGAGTTTGGGCAAAGCTTCGATGAATCTACATGTATACCATGAGAGTTTAGTATCACCACAACAATAA 1035 0.3604 MVTPSGISKLLANRSIDSSSIIIPEIVDLQQSGNRYLFSGNDGETKLTAIIPKSKFDAKPLNVYSRRRKRRKSQLVLLLFLPEEIIVNILLRLPVRTLLQFKCVCKSWKTLISDPRFAKNQILTSTVKPVNPVIFSSTCETTILGSCNGLLCLYENSHFRLWNPKNLPPLFVLNIIFSHFWLGKFVSGTLNWIVNKDFNSIKQDVIVSFDVEKQIYEEMLLPQHDGDNVRNLVLHVLSNCICVSFDHPKESHWVVWIMKNYGVVESWTKLKMIPQNKLTPDIRRCPSFDTLFILENCVILFRLKNGKLVVYNLNNNGRLNYQKSLGKASMNLHVYHESLVSPQQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0026 344 SUPERFAMILY F-box domain 78 135 IPR036047 GO:0005515
Mal8g0026 344 ProSiteProfiles F-box domain profile. 75 121 IPR001810 GO:0005515
Mal8g0026 344 SMART fbox_2 81 121 IPR001810 GO:0005515
Mal8g0026 344 PANTHER PROTEIN, PUTATIVE-RELATED 182 323 - -
Mal8g0026 344 PANTHER PROTEIN, PUTATIVE-RELATED 80 169 - -
Mal8g0026 344 Gene3D - 80 117 - -
Mal8g0026 344 Pfam F-box domain 81 117 IPR001810 GO:0005515
Mal8g0026 344 PANTHER OS02G0783600 PROTEIN 182 323 - -
Mal8g0026 344 PANTHER OS02G0783600 PROTEIN 80 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0026 Mal-Chr8 550611 551811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0026 2 223 Core DNA Replication Machinery Family AT5G08020 26.568 1.01e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0026 - - mtr:MTR_2g055970 258.455