Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5445 ATGGAAGCACAAGATTACTTTGTCGGTGGCTACTACGGTGCCGGCGAAACCAACCAATTCTCGCCGGAGAAACGTCACGGTGACCAGAAACCACCGTGTGAGCCTTTCGCCATTGATGATCTTCTCGATTTCTCCAATGCTGATGCAATTATGTCTGACGGTTTCTTCGACAACAATGTCGCCGGAAATTCCACCGACTCTTCCAATGTCACCGCCGTTGACAGCTGTAACTCGTCTGGCTCCGGTGGAGATAACCGCTTTTCAGGCTCAATTGTTCCGTATGGTTTCTCCGGTGATGTTCATCTCACCGGCGAACTCTGTGTTCCGTATGATGATATGGCGGAACTAGAATGGCTTTCGAATTTTGTGGAAGATTCATACTCCGCTGAAGAAGAATTGAAAACTTTGCAACTTCTCTCCGGCGCCGGTGCCGTTAAACCGCAAACACCGGAATCCTCATCTTCCACCGACACACCTCCGTCATTTTCCACCGACGAAACCGCTCGTAACGCTACCTTTCTCCGTCCGGAAACACCGCTACCTGGAAAAGCACGTAGCAAACGCTCACGCGCTGCACCAGGAGACTGGTCCACGCGCCTACTCCATCTCCCCGACGCGCCACCGTCACAGACGAAAAATTTTCCAATCACTTCAGTGAAGAAGCGTGAGGATCCGAATGTGGAATGTTCCGGAAGAAAATGTCTCCACTGCGGCACGGATAAGACTCCGCAGTGGCGAACCGGACCGATGGGACCGAAAACACTATGCAATGCGTGTGGTGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCGGCGGCGAGTCCAACTTTTGTTTCGGCGAAGCATTCGAATTCGCATAGGAAAGTTTTGGAACTGAGGAGGCAGAAAGAGATGCAAAGATCATCACAGCATCATCATCATCATCAACATCAACAGCTTCTGAGTCACAGTTCAATTTTCGGCGTTTCATCTAACGGTGGAGATGATTTCATCAATTATCATCATCATTGTGGGCCAGAGTTTAGACATGTTATCTAG 1047 0.5005 MEAQDYFVGGYYGAGETNQFSPEKRHGDQKPPCEPFAIDDLLDFSNADAIMSDGFFDNNVAGNSTDSSNVTAVDSCNSSGSGGDNRFSGSIVPYGFSGDVHLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAGAVKPQTPESSSSTDTPPSFSTDETARNATFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPSQTKNFPITSVKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHHHHQHQQLLSHSSIFGVSSNGGDDFINYHHHCGPEFRHVI* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5445 348 Pfam GATA zinc finger 234 267 IPR000679 GO:0006355|GO:0043565
Mal7g5445 348 PANTHER GATA TRANSCRIPTION FACTOR 9 1 348 - -
Mal7g5445 348 MobiDBLite consensus disorder prediction 146 171 - -
Mal7g5445 348 CDD ZnF_GATA 233 280 IPR000679 GO:0006355|GO:0043565
Mal7g5445 348 MobiDBLite consensus disorder prediction 297 317 - -
Mal7g5445 348 ProSiteProfiles GATA-type zinc finger domain profile. 228 264 IPR000679 GO:0006355|GO:0043565
Mal7g5445 348 ProSitePatterns GATA-type zinc finger domain. 234 259 IPR000679 GO:0006355|GO:0043565
Mal7g5445 348 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 231 291 - -
Mal7g5445 348 SMART GATA_3 228 278 IPR000679 GO:0006355|GO:0043565
Mal7g5445 348 PANTHER GATA TRANSCRIPTION FACTOR 1 348 - -
Mal7g5445 348 MobiDBLite consensus disorder prediction 142 215 - -
Mal7g5445 348 Gene3D - 229 316 IPR013088 GO:0006355|GO:0008270
Mal7g5445 348 PIRSF Txn_fac_GATA_plant 20 324 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5445 Mal-Chr7 125356949 125358134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5445 34 348 C2C2-Gata Transcription Factor Family AT4G32890 47.059 1.34e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal7g5445 GATA 7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5445 - - cam:101510199 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5445 7 125356949 125358134 Mal7g5445 7 125356949 125358134 ECH