Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5440 ATGACACAAACAACAACAACAACATCTTCACAAACAACCACAACAACAACCTCAAACTCCTCAACCTCTTCCACTTCTTCACAACCCTCACATTCAACCCAAAAACAAAACCCAACAAAGCCTAAAAGGCTTAAAGACGACGGCGACGACAACAACAACAATAACAATAACAAACATCCAACTTACCATGGAGTAAGAAAACGCAACTGGGGAAAATGGGTGTCTGAAATTCGCGAACCACGCAAAAAATCACGAATTTGGCTCGGAACATTCTCAACACCAGAAATGGCAGCTAGAGCACATGATGTAGCAGCTTTAACCATCAAAGGCAAAACCGCAATTCTCAATTTTCCTCATTTATCAAACATGCTTCCAAGACCAGCAACATCAGCACCACGTGACATTCAAGCTGCAGCAACTGCTGCAGCTGCTATGGTTGACTTTGATGATCCTATCATGCACGTGACAAGTTGTTCTGAATCTGAGTCCGTTGAAGAACTTAGTCAAATTGTTGAACTTCCTAAAATTAATGAAGAAGGTGAAGATGATTCTGTTGATAGTAATTGGATTTATCATAATCCTTCTCCGTTAATTGGGTTTGAAGGAATTGAATTCTATGCTACTTTTTCTGATGATTTTTTCTTACCATTTTGGGATTGA 660 0.3955 MTQTTTTTSSQTTTTTTSNSSTSSTSSQPSHSTQKQNPTKPKRLKDDGDDNNNNNNNKHPTYHGVRKRNWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGKTAILNFPHLSNMLPRPATSAPRDIQAAATAAAAMVDFDDPIMHVTSCSESESVEELSQIVELPKINEEGEDDSVDSNWIYHNPSPLIGFEGIEFYATFSDDFFLPFWD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5440 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 212 - -
Mal7g5440 219 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Mal7g5440 219 Pfam AP2 domain 61 110 IPR001471 GO:0003700|GO:0006355
Mal7g5440 219 MobiDBLite consensus disorder prediction 39 53 - -
Mal7g5440 219 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Mal7g5440 219 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Mal7g5440 219 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Mal7g5440 219 MobiDBLite consensus disorder prediction 1 37 - -
Mal7g5440 219 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 212 - -
Mal7g5440 219 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Mal7g5440 219 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Mal7g5440 219 MobiDBLite consensus disorder prediction 1 66 - -
Mal7g5440 219 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5440 Mal-Chr7 125235425 125236084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5440 3 186 AP2-EREBP Transcription Factor Family AT5G11590 47.030 8.20e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g5440 AP2 3.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5440 K09286 - gmx:100804056 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5440 7 125235425 125236084 Mal7g5440 7 125235425 125236084 ECH