Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5420 ATGGTTGGTTTTCCTTCAAAAATGGCTGTTCCAAAAGTGAATGAAAAGTTGCTTGAAGACCTTGAAGTAATGGGATTTCCACATGCAAGGGCAACAAGAGCACTTTATTATTCTGGAAATACCACCTTAGAGGATGCTATTACTTGGATGATTGATCATGAGAATGACACTGATATTGATAAGATTCCGTTGGTAGATGTAGACATTGATATTGATACCTCTCCATCATTCCATATCACAGAAGAAATGAGAATGAAAGCACAGTATCTAAGGGAACAAGAGCGCAAGAGGAAAAAGAATGAAGAAAAAATAATGGAAAGAGAAAGGGAAAAGGAGAGGATTCAATCAGGTAAGAAACTCCTTGAGGCAAAGCGGATTGCGGAAGAAAATGAAAGAAAACGGAATTTATCCTTGAGAAAAGCAGAAAAAGAAGAAGAACAAAGAGCTAGGAGTAACATTCTCAAAAAACTAGAGCAGGATAAGTTAAATAGAAGATCTAAACTTGGATTACCTTTAGAAAGCCAAGAAAATTTGAGATCACCAGCCATTGTAATAAAGCAAGAAAAGATTTCAAAGCCTGTTTATACAACCACAAAAGTTGAGCATTTAAGAGAATGTTTGAGGTCTCTTAAGCGTGAACACAAGGGTGAGAATGCAAGAATCAGAAGGGCCTTTGAAACACTTCTAGTGTATATTGGAAATGTTGTCAAGAATCCTAAGGAAGAAAAATACAGGAAGATTAGACTGAGCAATCCATTATTTCAGGATAGAGTTGGAAGTTTAGATGGAGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAAATGGTGACTTCTTGTATCTTCCTAGTGAAAAGGTTGACATGGAACTACTAAGTTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAATCCTTTCTTTGGACTTTTAAGTACTTAA 942 0.362 MVGFPSKMAVPKVNEKLLEDLEVMGFPHARATRALYYSGNTTLEDAITWMIDHENDTDIDKIPLVDVDIDIDTSPSFHITEEMRMKAQYLREQERKRKKNEEKIMEREREKERIQSGKKLLEAKRIAEENERKRNLSLRKAEKEEEQRARSNILKKLEQDKLNRRSKLGLPLESQENLRSPAIVIKQEKISKPVYTTTKVEHLRECLRSLKREHKGENARIRRAFETLLVYIGNVVKNPKEEKYRKIRLSNPLFQDRVGSLDGGVEFLELCGFERNGDFLYLPSEKVDMELLSSAGFVLNSAMTNPFFGLLST* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5420 313 SUPERFAMILY UBA-like 10 62 IPR009060 GO:0005515
Mal7g5420 313 Coils Coil 126 160 - -
Mal7g5420 313 MobiDBLite consensus disorder prediction 91 116 - -
Mal7g5420 313 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 8 313 - -
Mal7g5420 313 Gene3D - 200 301 - -
Mal7g5420 313 Gene3D - 15 60 - -
Mal7g5420 313 Pfam PUB domain 221 288 IPR018997 -
Mal7g5420 313 SUPERFAMILY PUG domain-like 197 307 IPR036339 -
Mal7g5420 313 Coils Coil 90 115 - -
Mal7g5420 313 PANTHER F13M7.16 PROTEIN 8 313 - -
Mal7g5420 313 SMART PGNneu 223 284 - -
Mal7g5420 313 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 12 53 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5420 Mal-Chr7 124936361 124940923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5420 8 311 C2H2 Transcription Factor Family AT1G04850 57.143 2.56e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5420 K24348 - gmx:100781260 455.677