Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5348 ATGGGTATTTCCAGGGATAATAGGAACAAAAGGCTTGCCACTGGTGGCAAGAGGAAGACATGCATGAAGAAGAGAAAGTATGAGCTCGGTCGCCAGCCAGCTAACACGAAACTATCAAGCAACAAAACAGTGAGAAGTATTCGTGTTAGAGGTGGAAATATGAAATGTAGAGCTTTGAGATTGGATACTGGAAACATCTCATGGGGAAGTGAAGCTGTCACTCGGAAAACCCGTTTGCTAAATGTGGTTTACAATGCTTCCAACAATGAGCTTGTCCGAACTCAGACTCTTGTTAAGAGTGCTATCGTGCAGGTCGATGCTGCTCCATTCAAGCAATGGTACCTTCAACACTATGGTGAGGCTGAAGCTGCTACAGGAGAAACCAAAAAGAGTGACCATGTGCTGAGAAAATTGGTGAATCGCGAGAAAGATCGCCAGCTCGATGCCCACATTGAAGAGCAGTTTGGTGGTGGACGATTACTTGCATGCATTTCTTCTCGACCTGGTCAATGTGGCAGGGCTGATGGCTACATTTTGGAAGGTAAGGAGTTAGAATTCTACATGAAGAAACTCCAGAGGAAGAAGGGCAAGGTTGCTGCTTGA 603 0.4561 MGISRDNRNKRLATGGKRKTCMKKRKYELGRQPANTKLSSNKTVRSIRVRGGNMKCRALRLDTGNISWGSEAVTRKTRLLNVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGEAEAATGETKKSDHVLRKLVNREKDRQLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKVAA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5348 200 CDD Ribosomal_S8e_like 5 179 - -
Mal7g5348 200 Gene3D Ribosomal protein S8e, subdomain 108 157 IPR042563 -
Mal7g5348 200 PANTHER 40S RIBOSOMAL PROTEIN S8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mal7g5348 200 Pfam Ribosomal protein S8e 5 179 IPR022309 -
Mal7g5348 200 Gene3D - 27 195 - -
Mal7g5348 200 PANTHER RIBOSOMAL PROTEIN S8E FAMILY PROTEIN 1 199 - -
Mal7g5348 200 TIGRFAM eS8: ribosomal protein eS8 1 181 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5348 Mal-Chr7 123484862 123486548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5348 1 188 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 78.571 2.36e-106 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5348 K02995 - dcr:108219610 334.339