Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5346 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGAGACTGGTGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTACGAGCTCGGTCGCCAGCCAGCTAACACCAAGCTGTCAAGCAACAAGACAGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTGAAGTGGAGAGCTCTGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCCGTCACTCGCAAGACCCGTTTGCTCGACGTGGTTTACAATGCTTCCAACAATGAGTTGGTGCGAACTCAGACACTTGTGAAGAGTGCTATTGTGCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATTGGTAGGAAAAAGAAAACTGTTGGCAAGAAAGATGAGGAGGCTGAGGCTGCTACAGAAGAAGTCAAAAAGAGTGCCCATGTGCAGAGAAAATTAGAGCAACGCCAGAAAGATCGCCAACTTGATGCCCACATTGAAGAGCAGTTTGGTGGTGGACGATTGCTTGCATGCATTTCTTCTCGACCTGGTCAATGCGGCAGAGCTGATGGCTACATTCTGGAAGGTAAGGAGCTAGAGTTCTACATGAAGAAACTCCAGAAGAAGAAGGGCAAGGGTGCTGCTTAA 648 0.4815 MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTVGKKDEEAEAATEEVKKSAHVQRKLEQRQKDRQLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5346 215 Pfam Ribosomal protein S8e 5 194 IPR022309 -
Mal7g5346 215 MobiDBLite consensus disorder prediction 1 35 - -
Mal7g5346 215 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Mal7g5346 215 CDD Ribosomal_S8e_like 5 194 - -
Mal7g5346 215 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mal7g5346 215 Gene3D Ribosomal protein S8e, subdomain 108 173 IPR042563 -
Mal7g5346 215 Gene3D - 27 210 - -
Mal7g5346 215 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 - -
Mal7g5346 215 TIGRFAM eS8: ribosomal protein eS8 1 196 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5346 Mal-Chr7 123474070 123476518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5346 1 203 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 86.207 4.52e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5346 K02995 - gmx:100794937 363.229