Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5344 ATGGAAAACCAATTCTTTTTAAATGCTGGTTTTGAACCTTACCAAACCCAAGATTGTTTTTTCAACCCAAATTGGGACAAGTCAACGGATCAAAATCTTAACTTTGATTCAGCACTTAGTTCAATTGTCTCATCCCCAGCAGCTACATCATCACCAACACCAAATCCAAACATGTCCAATGAAAATTTCATGATGAGAGAATTAATAGGAAAATTAGGAACTTTTGGTGAGATCTCACCACATTCTTCTAACCCTTTGGTTGTACCAATGATGAACCATTTTGTGAAAGGGAATATGCAAAAACCAATGTCTAGTGTGGCAGAATTTTCACCTGATCCTGGTTTTGTTCAAAGGGCTGCAAAATTTTCTTGCTTTGGTAGCAAGAGTTTCAATGATAGAAGTAACCAATTCGTGATGAACAACAATGTTGAATTAGCACAAAGATCTAATAATTTCATGGGAAATGGAGTGAAGCTATTACCAAGAGTTTCAAGTAGTCCTTCACTCAAAACATTTGGATCTCAAATGGTTAACCATGAGAACAAGAATTCTCCATTGCAACAAGAAAATGAGAGAATGGAAGTGACTAATTCTCAAGAGGAATCTACAATCTCTGAGCAAAATACACCAAATGGTGAAATTTGTGTGAAAACTTCACCTGATATGAATTCAAGAAAAAGAAAAGCTTCTTCTTCCAAAGCAAAAGCTTCAAACTCTATCAATCCTACCAAGGGTGTTGAAGGTAGTGGTGAAGACTCAAATGCAAAGAAAAGCAAGGCAAATGAAAATGGTGGCATGAATAATATGGAGGAAGAGTCCAAAGAAAATGCAGGGGAAGAGAAACAGAACAAGAGTGACTCAAAAGCTCCTGAACCTCAAAAAGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGACAGTCATAGTCTTGCAGAACGTGTTCGGAGAGAGAAAATAAGTGAGAGGATGAAACTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTTACTGGAAAAGCACTTATGCTTGATGAAATTATAAATTATGTTCAGTCATTGCAGCGTCAAGTTGAGTTTCTGTCCATGAAATTGTCTTCTGTTAACAATACAAAGATGGATTTAAGTATTGAAAGTCTTGTTGTATCAAAAGATATATTTCAATCAAATAATTGTTTGCAAAACTCAATATTCCAATTAGATTCCTCAGCACCATCCTTTTATGGGCAACAACCCCAGCAAAACCAAATTATTCATAATAACATTCCTAATACAAATGGGACCCACTGCTCAGTGGAACCATTGGATTCTTCTTTGTGTCATAATATTGGCATGCATTTACCTTTCCTAAATGGGCTTAATGAAGGTGGCTCTCAGTATCCATTAACATTCTCTGAGGAAGACTTAAACACAATTGTTCAGATGGGATTTGGCCAAACTTCAAACAGGAATACACCAATACACTCCCCAAATTTCAACGGTTCAAATCAAGCAACACAAATGAAAATTGAGCTCTAA 1521 0.3642 MENQFFLNAGFEPYQTQDCFFNPNWDKSTDQNLNFDSALSSIVSSPAATSSPTPNPNMSNENFMMRELIGKLGTFGEISPHSSNPLVVPMMNHFVKGNMQKPMSSVAEFSPDPGFVQRAAKFSCFGSKSFNDRSNQFVMNNNVELAQRSNNFMGNGVKLLPRVSSSPSLKTFGSQMVNHENKNSPLQQENERMEVTNSQEESTISEQNTPNGEICVKTSPDMNSRKRKASSSKAKASNSINPTKGVEGSGEDSNAKKSKANENGGMNNMEEESKENAGEEKQNKSDSKAPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNNTKMDLSIESLVVSKDIFQSNNCLQNSIFQLDSSAPSFYGQQPQQNQIIHNNIPNTNGTHCSVEPLDSSLCHNIGMHLPFLNGLNEGGSQYPLTFSEEDLNTIVQMGFGQTSNRNTPIHSPNFNGSNQATQMKIEL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5344 506 Gene3D - 302 376 IPR036638 GO:0046983
Mal7g5344 506 CDD bHLH_AtBPE_like 295 381 - -
Mal7g5344 506 PANTHER BHLH TRANSCRIPTION FACTOR 97 499 - -
Mal7g5344 506 PANTHER BHLH TRANSCRIPTION FACTOR 13 90 - -
Mal7g5344 506 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 370 IPR036638 GO:0046983
Mal7g5344 506 MobiDBLite consensus disorder prediction 170 294 - -
Mal7g5344 506 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 97 499 IPR024097 GO:0006355
Mal7g5344 506 MobiDBLite consensus disorder prediction 233 248 - -
Mal7g5344 506 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 355 IPR011598 GO:0046983
Mal7g5344 506 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 13 90 IPR024097 GO:0006355
Mal7g5344 506 MobiDBLite consensus disorder prediction 170 218 - -
Mal7g5344 506 MobiDBLite consensus disorder prediction 483 506 - -
Mal7g5344 506 Pfam Helix-loop-helix DNA-binding domain 309 356 IPR011598 GO:0046983
Mal7g5344 506 MobiDBLite consensus disorder prediction 268 294 - -
Mal7g5344 506 Coils Coil 352 372 - -
Mal7g5344 506 SMART finulus 311 361 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5344 Mal-Chr7 123440127 123443021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5344 1 460 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 41.498 2.71e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g5344 HLH 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5344 - - gmx:100801233 572.778