Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5340 ATGATTCGATTTCTTTCAAATGGGTCAAAAAAATTTCAGCATTTTACATTCACCCCGGTAATTATAAAAGTTTTCCCAGTTTTTACGCCTGCCACCTATTCGACGAAAGTCCCAACCGAAAATGAGGTTGAATTGCAAAAATGTAAAGACAAATGGAAGGATGCTACTGAAGTTTTAAGTAAATGGGGTTGTGATGATGAAGATTTGACAAGAATATTCGCTCGTTGCCCGTCTTTGCGCAATGCGGATCCTTCTCAGGTACAGTCGAAACTTTGCTTGCTCAGTAACTTGGGTTTAGGGTCAGCTGAACTTGTGAAGATTATCAATTGTAGGCCTCGATTTTTCAGGACTCGGATTAACCATAATTTCAATGAGAGGCTTGACTCTCTTATGTCATTGTTTGAGTCAAAGGAAATGCTTCATAAGGCGATTGCAAGAAACCCTTCATTGCTATGTGAAAATGGCTATGACATCGAACATATTGTTGCACAATATGCAGAGTTAGGTGTACCGAAAAGGGATTTGGTTCAAATGCTGATTTTGCGGCCGACTATTATTTCGAGAACTTCCTTTGACGATGAGAAAATGGAATATATAAGTAAGACTGGGATTTCAAAGGATTCAAAATTGTACAAATATGTGGTGACATTAATAGGCGTCTCTCGCGTGGAAACGATTCGCGAAAAGGTGTTGAATTTTACAAAGTTTGGCTTTTCGGATGATGAGATACTCGGTCTTTTCGGGAAGTCTCCTAATATTTTGTCATTGTCAACTGATAAGGTTCAGAGGAACATGACTTTCATTTTAGGAACAATGAAGCTTGAAGCTAAGATAATCTTAAAGCATCCATATCTCTTGTTTTTAAATATGGAGACAGTTTTGAAGCCACGAGTGCTTCTAGCAATGAAGATACAAGATATGGACTCTAAGTTGAAAACACCCTCAATACTTAGAGCATTGAGGATGTCAGAGGAGAGGTTTTTAAATTTGTTTGTCGAATGCCATGACAAGGAAATTGCTGAGGAGTTGATGGAATTTTATAAAAGGACAAAACAGGTTAAGAGATTAGCAGCTTCATCAAAGAATTGGACTACTAGAGGATTCCCTTTCTGA 1113 0.3801 MIRFLSNGSKKFQHFTFTPVIIKVFPVFTPATYSTKVPTENEVELQKCKDKWKDATEVLSKWGCDDEDLTRIFARCPSLRNADPSQVQSKLCLLSNLGLGSAELVKIINCRPRFFRTRINHNFNERLDSLMSLFESKEMLHKAIARNPSLLCENGYDIEHIVAQYAELGVPKRDLVQMLILRPTIISRTSFDDEKMEYISKTGISKDSKLYKYVVTLIGVSRVETIREKVLNFTKFGFSDDEILGLFGKSPNILSLSTDKVQRNMTFILGTMKLEAKIILKHPYLLFLNMETVLKPRVLLAMKIQDMDSKLKTPSILRALRMSEERFLNLFVECHDKEIAEELMEFYKRTKQVKRLAASSKNWTTRGFPF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5340 370 PANTHER CGI-12 PROTEIN-RELATED 21 370 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 370 - -
Mal7g5340 370 Gene3D Transcription termination factor 3, mitochondrial 34 213 IPR038538 -
Mal7g5340 370 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 Pfam mTERF 190 328 IPR003690 GO:0003690|GO:0006355
Mal7g5340 370 Pfam mTERF 57 185 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal7g5340 mTERF 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5340 K15032 - gmx:100799629 479.944