Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5339 ATGTATTCATCTTCATCATCATCCACAAATCCACAGTATCTCCATGACGTATTCATCAACTTCAGAGGCGAAGACGTTCGTCGCACCTTCGTCAACCAGCTCTACGCAGGACTCTCAAACAAAGGAATCAACACATTCCTCGACAACGAAAACCTCGAAAAAGGCGAAGAAATCGGAACAGAACTTTTCCGAGCAATTTCAGTCTCACGTATCTCAATAATCGTTTTCTCGAAAAACTACGCTGAATCGAGTTGGTGTTTAAACGAATTGGAAAAAATCATGGAGTGTCGTAGACTTCACGGTCAAGTTGTTTTACCGGTTTTTTATGACGTTGATCCTTCTGTTGTAAGGCATCAGAAAGGTGAATTTGGTAAAGCTTTGGAAGTTGCGGCGAAAAGTAAGTATATAATTGAGGAAGTTATGGAAAAGGTTTTGAGTAGATGGAGAATTTTGTTGACTGAAGCTTCTAATTTGTCTGGTTGGGATGGAAGCGCTTTCAGGAGTGACGGTGAATTAGTGAAGAAAATTGTTGAGGCCATTTTGCCAAAAGTAGACAACACAACCTTGTCTATAACTGAATTTCCAGTTGGATTAGAATCTCATGTAAAGCAAGTGGTTGGGTTGATTGAGAAATATTCGGGCGATGTTTGTATGGTAGGGATCTGGGGCATGGGAGGATCAGGTAAAACAACTGTAGCCAAAGCCATCTACAATGAAATTCATCGTAGATTTAATTGTACTAGTTTCATTGAAAACATTAGAGAAGTTTGTGAAAAGGATACTAGAGGGCATATACATTTACAACAACAACTTCTTTCAGATGTCCTCAAATCAAAGGAGAAGTTACATAGTCTTGCATTGGGGACAGCTAGGATCCAGAGAGTGCTTTCTGGAAAGAAAGCACTCGTGATACTTGATGATGTGACCGATTTTCAGCAAATAAAAGTCCTATGCGGAAATCATAAATTTTTTGGTGCTGGAAGTGTGTTAATTGTTACAACCAGGGATGTACACATACTTAATTTACTCAAAGTTGATTCCGTCTATAAAATGGAGGAAATGCACAAAAATGAGTCCCTTGAGCTATTCTCTTGGCATGCTTTTAGAAAAGCAAGTCCTAAAGGAGGCTTTGGTGAACTCTCAAGAAATGTGGCTGCTTATTGTGGGGGGTTACCACTGGCTCTTGAAGTCCTTGGATCCTACTTATTTGACAGGACAAAACAAGAATGGATAAGCGTACTATCGAAGTTAGAGAGAATTCCCAATGGTCAAGTGCAAGAGAAGCTGAGAATAAGCTATGATGGTTTAAAGGATGATATGGTAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAGGACAGAGCCTATGTTACAGAGATACTAAATGGCTGTGGACTTTATGCTGATATTGGAATAGCTATCCTCATAGATCGGAGCCTCCTAAAAGTTGAGAAGAATAACAAGCTTGGAATGCACGATTTAATAAGAGACATGGGAAGAGAAATTGTCCGCGAAAGTTCGGCAAGAGAACCTGAGAAGCGTAGTCGATTGTGGTTTCATGAGGATGTACATGATGTTTTGGCAAAAAATACTGGAACAGAAACCATTGAGGCACTGATTTTGAACTTGCAAAGAACAGGCAGAGTTAGCTTTGGTACTAATGCTTTCCAAGACATGAAGAAACTAAGACTTTTACAACTTGATAGTGTTGACCTCACTGGAGATTTTGGGTATCTTTCCAAACAACTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTTTGTACCCAATGACTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAATATAGCAATGTCAAACAAGTTTGGAAGGAAACCAAGTTGTTGCATAAGCTAAAAATTCTCAATCTCAGTCATTCCAGGCACTTGAAAAGCACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAACTCATTATGAAAGATTGTCAAAGTTTATCCAACATACACCCGTCCATTGGAGATCTCAAAAATCTTCTTCTCATAAATTTGAAGGATTGTGCAAGTCTTGTCGAGCTCCCAAGAGAGATCTATCAATTGAGATCAGTGAAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGTCAAATTGGAAGAAGATATAGTGCAAATGAAGTCCTTGACAACTCTAGTTGCAGCAAATACTGGTGTCAAACAAGTGCCTTTTTCGATTGTTAGATCAAAAAACATTGGATATATATCCCTATGTGGATATGAAGGTTTATCACGGGATGTTTTTCCTTCTATCATATGGTCTTGGATGTCACCAACAATGAATTCCTTAGCGCATATTCGCCCTTTTGGTGGAATTTCAATGTCTCTTGTTTCCTTGGATGTAGATAGTAATAATTTGGGTTTGGTCTATCAATCACCAATACTTAGCAGCTGTTCAAAACTTAGATGTGTTTCGGTACAATGTCACTCTGAGATTCAACTGAAACAAGAATTGAGAGTATTTCTTGATGATCTTAATGAGTTGGAAACATCTCATGCATCACAAATCTCGGATCTTTCCCTGAAATCTATTTTGATTGGGATGGGCAGTTGCCACATAATGAACGAGACTCTTCGCAAGAGCTTATCACAGGGATTGGCAACTAATGATTCTAGGGCTTCTTTCCTTCCGGGTAACAATTATCCTTCTTGGTTAGCCTATACATGTGAAGGACCTTCAGTATATTTTCAAGTGCCTGAGGATAGCGATTGTGGAATGAAGGGAATAACTTTATGTGTTCTTTATTCATCTACACTTGAAAACATGGCAGCTGAATGTCTTACTAGTGTCTTGATCATTAATTACACAAAATTCACTATTCATATATACAAGAGAGACACGGTAATGTCCTTTAACAATGAAGATTGGGAAGGTGTAGTATCAAATTTAGGAGTTGGTGACAATGTGGAGATTTTTGTAGCTTTTGGGCATGGATTGACTGCTAAGGAGACCGCTGTCTATCTAATATATGGTCAGTCAACTGCAATGGAAATTGAGCCATCAATTACTGTGAAAGTTGAGCCTTCAATTACTGTGAAAGTTGAGCCAATATCTGAAGTGCAGGTGCAACTATCACATGTGGAAATGGAGTCATCACCTGGAATGGAAGCACCACCATCATCTGATTTGGAAATGAAATCACCACTTGCTGTCAAGAACGAGCCATTACCAAAGCCAAATGATAAAATCTTTGCAAGATTTGCAAAGAGAATGGGAGGATGTTTATGCTTGAACCAGAATTGA 3294 0.3859 MYSSSSSSTNPQYLHDVFINFRGEDVRRTFVNQLYAGLSNKGINTFLDNENLEKGEEIGTELFRAISVSRISIIVFSKNYAESSWCLNELEKIMECRRLHGQVVLPVFYDVDPSVVRHQKGEFGKALEVAAKSKYIIEEVMEKVLSRWRILLTEASNLSGWDGSAFRSDGELVKKIVEAILPKVDNTTLSITEFPVGLESHVKQVVGLIEKYSGDVCMVGIWGMGGSGKTTVAKAIYNEIHRRFNCTSFIENIREVCEKDTRGHIHLQQQLLSDVLKSKEKLHSLALGTARIQRVLSGKKALVILDDVTDFQQIKVLCGNHKFFGAGSVLIVTTRDVHILNLLKVDSVYKMEEMHKNESLELFSWHAFRKASPKGGFGELSRNVAAYCGGLPLALEVLGSYLFDRTKQEWISVLSKLERIPNGQVQEKLRISYDGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAILIDRSLLKVEKNNKLGMHDLIRDMGREIVRESSAREPEKRSRLWFHEDVHDVLAKNTGTETIEALILNLQRTGRVSFGTNAFQDMKKLRLLQLDSVDLTGDFGYLSKQLRWVNWQRSTFNFVPNDFDQENLVAFELKYSNVKQVWKETKLLHKLKILNLSHSRHLKSTPDFSKLPNLEKLIMKDCQSLSNIHPSIGDLKNLLLINLKDCASLVELPREIYQLRSVKTLILSGCSKIVKLEEDIVQMKSLTTLVAANTGVKQVPFSIVRSKNIGYISLCGYEGLSRDVFPSIIWSWMSPTMNSLAHIRPFGGISMSLVSLDVDSNNLGLVYQSPILSSCSKLRCVSVQCHSEIQLKQELRVFLDDLNELETSHASQISDLSLKSILIGMGSCHIMNETLRKSLSQGLATNDSRASFLPGNNYPSWLAYTCEGPSVYFQVPEDSDCGMKGITLCVLYSSTLENMAAECLTSVLIINYTKFTIHIYKRDTVMSFNNEDWEGVVSNLGVGDNVEIFVAFGHGLTAKETAVYLIYGQSTAMEIEPSITVKVEPSITVKVEPISEVQVQLSHVEMESSPGMEAPPSSDLEMKSPLAVKNEPLPKPNDKIFARFAKRMGGCLCLNQN* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5339 1097 Pfam TIR domain 15 192 IPR000157 GO:0007165
Mal7g5339 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 448 IPR027417 -
Mal7g5339 1097 Pfam NB-ARC domain 199 429 IPR002182 GO:0043531
Mal7g5339 1097 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 1006 - -
Mal7g5339 1097 SUPERFAMILY L domain-like 494 857 - -
Mal7g5339 1097 Gene3D - 13 186 IPR035897 -
Mal7g5339 1097 Gene3D - 187 348 IPR027417 -
Mal7g5339 1097 SMART till_3 14 158 IPR000157 GO:0007165
Mal7g5339 1097 Gene3D - 353 437 IPR042197 -
Mal7g5339 1097 ProSiteProfiles TIR domain profile. 13 180 IPR000157 GO:0007165
Mal7g5339 1097 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 1006 IPR044974 GO:0006952
Mal7g5339 1097 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 161 IPR035897 -
Mal7g5339 1097 PRINTS Disease resistance protein signature 626 642 - -
Mal7g5339 1097 PRINTS Disease resistance protein signature 388 402 - -
Mal7g5339 1097 PRINTS Disease resistance protein signature 218 233 - -
Mal7g5339 1097 PRINTS Disease resistance protein signature 295 309 - -
Mal7g5339 1097 Gene3D Ribonuclease Inhibitor 543 885 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5339 Mal-Chr7 123271061 123276654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5339 15 743 WRKY Transcription Factor Family AT4G12020 29.867 1.44e-80 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5339 - - mtr:MTR_8g011710 1345.1