LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g5331	ATGATCAAGGAACGACTTTGCACAAAACGGGCACTTGTTGTACTTGATGATGTGAGTGAGTTTGAGCAATTCAATGCATTATGCGGAAATCGAAATGGGATTGGTCCGGGAAGTATAATAATCATCACAACAAGAGATGTGCGTCTACTTGATATCCTTGGAGTTGACTTTATATATGAAGTGGAGGGATTGAATGCTCATGAGTCCCTTGAGCTTTTAAGTCGGTATGCTTTTAGGGAGGCAAGCCCAATAAAAGGTTTCCTTAGTATCTCAGAAGATGTAGTTTCCTATTGTGGTGGACTACCACTAGCTCTTGAAGTACTTGGATCTTACTTGTTCAAGAGGAGAAAACAAGAGTGGCAGAGTGTATTATCAAAGCTAGAAAAGATACCCAATGATCAAATACATGAGATACTAAAAATAAGCTTCAATGGTTTAAAGGATCGTATGGAAAAGAATATATTTCTTGATGTCTGTTGTTTCTTTATCGGTAAGGATAAAACTTATGTTACAGAGATACTAAATGGCTGTGGACTTCATGTTGATATTGGAATAACAGTTCTGATAGAGAGAAGCCTCGTAAAAGTTGAAAAGAATAACAAGCTTGGAATGCATGCTCTGCTACGAGACATGGGAAGAGAAATTGTCCGTGAAAGTTCACCTGAGGAGCCTGAGAAGCGTAGTCGATTGTGGTGTCATGAGGATGTAGTTGATGTATTGACCGACCATACTGGAACGGAAGCCATCCAGGGATTGGCTATGAAGTTGCCAAGGACCAGTAGAAGATTGAGATTGTTGCAACTTGATCATGTACAACTCATCGGAGATTATGAGTGTTTTTCAAAGCATCTGAGATGGCTTTCTTGGCAAGGATTTCCTTTAAAATACACGCCAGAAAACTTTTATCAGAAAAATCTAGTTGCTATGGACTTAAAACACAGTAATCTTACACAAGTTTGGAAGAAGCCTCAGTTGTTGCAGAAGCTAAAAATTATCAATCTCAGTCATTCTAAGTACTTGAAAAGCACCCTTGACTTTTCAAAATTACCGAATCTGGAAAAACTCATTATGAAGGATTGTCAAAGTTTGTCAGAGGTACACTCGTCCATTGGAGATCTCAAGAATCTTCTTCTGATCAATTTGAAAGACTGTACAAGTCTTAGTAATCTCCCAAGAGAGATATATCAATTGACATCAGTGAAAACTCTCATCCTTTCCGGTTGTTCAAAGATTGAAAAATTGGAAGAAGAAATATTGAAAATGGAATCCTTGACAACTCTAATTGCAGCAAATACTGGTGTCAAACAACTTCCCTTTTGGATAGTAAGGTCAAAAAGCATTGGATATATATCCCTATGTGGATATGAAGGATTATCACATGATGTTTTTCCATCTCTCATTAGGTCTTGGATGTCACCAACAATGAATTCCTTACCATACATTCCCCCTTTTAGTGGCATGTCAAAGTCTCTTGTTTCCTTGGATATAGAGAGCAATAATCTGGCTTTGGTCTATCAATCACAGATACTTAGCAGCTGTTCAAAACTTAGAAGTGTTTCGGTACAATGTGACTCAGAGATTCAACTGAAACAAGAATTCAGAAGATTTGTTAGAATTGGGGGCCTAACTCATCCTTACAAAATCGGCTTTGTGGGGTTGTGTTAG	1665	0.3802	MIKERLCTKRALVVLDDVSEFEQFNALCGNRNGIGPGSIIIITTRDVRLLDILGVDFIYEVEGLNAHESLELLSRYAFREASPIKGFLSISEDVVSYCGGLPLALEVLGSYLFKRRKQEWQSVLSKLEKIPNDQIHEILKISFNGLKDRMEKNIFLDVCCFFIGKDKTYVTEILNGCGLHVDIGITVLIERSLVKVEKNNKLGMHALLRDMGREIVRESSPEEPEKRSRLWCHEDVVDVLTDHTGTEAIQGLAMKLPRTSRRLRLLQLDHVQLIGDYECFSKHLRWLSWQGFPLKYTPENFYQKNLVAMDLKHSNLTQVWKKPQLLQKLKIINLSHSKYLKSTLDFSKLPNLEKLIMKDCQSLSEVHSSIGDLKNLLLINLKDCTSLSNLPREIYQLTSVKTLILSGCSKIEKLEEEILKMESLTTLIAANTGVKQLPFWIVRSKSIGYISLCGYEGLSHDVFPSLIRSWMSPTMNSLPYIPPFSGMSKSLVSLDIESNNLALVYQSQILSSCSKLRSVSVQCDSEIQLKQEFRRFVRIGGLTHPYKIGFVGLC*	555

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g5331	554	Gene3D	Ribonuclease Inhibitor	254	543	IPR032675	-
	Mal7g5331	554	PRINTS	Disease resistance protein signature	98	112	-	-
	Mal7g5331	554	PRINTS	Disease resistance protein signature	5	19	-	-
	Mal7g5331	554	PRINTS	Disease resistance protein signature	324	340	-	-
	Mal7g5331	554	Gene3D	-	63	147	IPR042197	-
	Mal7g5331	554	Pfam	NB-ARC domain	1	135	IPR002182	GO:0043531
	Mal7g5331	554	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	3	541	IPR044974	GO:0006952
	Mal7g5331	554	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1	157	IPR027417	-
	Mal7g5331	554	Gene3D	-	1	56	IPR027417	-
	Mal7g5331	554	SUPERFAMILY	L domain-like	204	521	-	-
	Mal7g5331	554	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	3	541	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g5331	Mal-Chr7	123096092	123107690	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g5331	1	412	WRKY Transcription Factor Family	AT5G45050	33.036	5.81e-60	213

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g5331	-		-	mtr:MTR_8g011710	860.136