LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g5327	ATGTCTTCTTCATCATCCACTCCTCAATGGATCTACGACGTGTTCCTCAGCTTCAGAGGCGAGGACACTCGCGGTACCTTCGTTGCTTATCTCCACGACACCCTCTCAAAAGCTGGAATCAACACTTACATCGACAATCGGCTTCAAAAAGGGACACAACTGGGACCAGAACTATTGGCAGCAATTGATGGTTCTCGCATTTCCATCATTGTTTTCTCCAAAAACTTTCACACATCTAGTTGGTGCCTTAAAGAGCTTGAACACATCATGAAATGCCGCAGAAATTATGGTCAGGTTGTTGTGCCCGTTTTTTACCACGTTGACCCATCGGTTTTGCGTCATCATACAGGTGATTTTGGAGAAGTTTTGCAAGAAACTGCAACAAAAAGTTCCTCAGGATGGGCAAGGAGAAATTTTGTGTTGTCCACTTGGAAGATTGCACTAACCGAAGTTGCAAATATATCTGGTTGGCATACCAAAAATTTCAGGGATGATGTTGAACTAACTTCTCAAATTGTTAAAGACGTTAAGATAAAGCGAAACAAAATATTATTGAATATTACCGAATTTCCTGTTGGATTGGGTACCCGTGTTCATAAAGTGATTCACTTTATTGAAAATCAATCAAGCAAAGTTTGCTTGATAGGGATCTGGGGTATGGGTGGATTGGGCAAAACAACCACAGCCAGAGCTATATACAACAAATTTCAGTGCAAATTTGTGGATCACAGTTTCATTGCAAATATTAGACATGTTTGTGAAGAAAGTGGTGAAGGGATTATTCATTTACAGGAACAGCTTCTTGCAAATATCTTGAAAACAAATGAGAAGATATACGACACTGCATCCGGGATAACCAAAATCAAAGACGCGTTTATGGGGAAAAAGGCGCTAATTGTACTCGATGACGTGAGCACATCTGAGCAAATAGAAGCCCTGTGTGGAAACCGTAAATGTTTTGGTTCGGGAAGCGTATTGATTGTTACATCTAGGGATGTACGCATACTTAAGTTACTTAAAGTTGACCGTATCTATAGCATAAAGGAAATGGACGAAAACAAGTCCCTTAAGCTTTTCAGTTGGCATGCTTTTGGAGAACCACGTCCAAAAAGAGACTTCGGAGACCTCTCAAAAAGCATAGTTAATTACTGTGGAGGATTACCATTTGCTCTTAAAACCATTGGAGATAAGTTACGTGACAGGCCAAAACAAGAATGGATAAGTGAACTATCAAAGTTAGAGAAAATTCCCAATTATCAAGTGCTAAAGAAACTGGAAATAAGCTATGATGGTTTGAAGGAGGATCATGAAAAGTCTATATTTCTTGACATATGTTGTTTCTTTATAGGTAAGGAGAGAGCCTATGTTTCAGAGATTCTAGATGGTTGTCAACTTCATGCTGGTGCTGGAGTACCTATTCTCATAGAGCGGGGCCTCTTAAAAGTTGAAAAGAATAACAAACTTGGAATGCATGATTTGCTACGAGACCTGGGAAGAGAGATTGTTCATAAAAGATCAATGGAAGAACATGGGAACCATAGGCGACTGTGGTTTCACGAGGATGCACATAAAGTATTGACAGAAAATACTGGAACAAAAACTGTGGAAGGATTGGTTTTGACGTCGCAAAGCACCAACAGTGTTGACATCAACACTACTTTCAAGGAGATGAAGAATTTGAGACTCTTACAACTTGATCGTGTTGGTCTTACCGGAGATTTTAAGAGTCTTTCTCAAGAACTGAGATGGCTCCATTGGCAGGGATTTACTCGCGAATGTATACCTGATGAGTTTTATCTGGGAAAGCTAGTTGTTTTTGAGTTAGAACACAGCAATATTAAACAAGTTTGGAAGGAAACCAAGCTGCTGGAGAACCTAAAAATTCTCAATCTCAGTCATTCCAACGACTTGAAAAGCACTCCTGACTTTTCAAAATTACCAAATCTAGAAAAGCTCATTATGGAGGATTGTCCAAATTTGTCTGAGTTACACCCGTCCATTGGGGATCTCAAGAATATTCTTCTGATCAATTTAAAAGACTGTACAAGTCTTAGCAATCTCCCAGAGAAGATATATCAATTGACGTCTTTGACAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGGCATAGTGCAGATGAAATCCTTGACAACACTTATCATAAAAGATACAGGTTTCCAACAGCCGTATTCAATAGTAAGATTGGAAAGCATCAGGTATATATCCCTATGTGGATCTGAAAGAACATCAGATGTTTTTCACCAGGTCCGAGATATGCTCTTATCCCTTATGCCCCCATCTGGAAACATGGCTTCATCTTTAGCTCCCATCAATGTACAGAATAATAACTCGGGCTTTCTATCACCAATAGAGAGCTTTTCACAACTTAGAACTGTTTGGATACAATGCCACTCAGAGATTCAACTAACTCAAGAATTTGGAAGAATTCTGGATGATCAAGCATCACAAATCTCAAATCGTTCCACGAAATCGCTTCTGTTTCGAATGGCAAGTTGCCATTTAGCTATTGACAAGAGCATATCACAGGGATTAACAAGCAATGGTTCGAGCAATTTTTTCCTTCCGGTTGCCAATCATTCTTCTTGGTTAGCCTGTATAGGTGAAGGACCTTCAGCACTATTTCAAGTTCCTAAGAATATTGATTGTGACATGGAGGGAATAATCTTACGTGTTGTTTATTCATCAAAATCTGAAAACATAGGAGATGACGGTTTTGCTGGTGTCTTGATCATTAATTACACAAAGTGCACCATCCACATTTACAAGCGAGACACAGTCATGTCCTTTAATGGTGAAGATTGGAAGAATGTAACATCAAATCTAGGACCTGGTGATGATGTGAAGATTTATGTAGCTTTTGAGCATGGATTGACTGTTGAGAAGACAATTGTTTATCTAATATCTGGCCAGTCAATTGTTGTGGAAGTTGATGATCCTAACATGGAAATGGAGCCATCACCAAAGCCCAATAAACGTATGTTTACAAGAAGACTTCCAAACAGAATGGGTGAATGTGTATGCTTGAACCAACATACGGATATAGGTTTGGGTGCATGTTTATGCTTGAACCATAATACGGACGGATAA	3123	0.3926	MSSSSSTPQWIYDVFLSFRGEDTRGTFVAYLHDTLSKAGINTYIDNRLQKGTQLGPELLAAIDGSRISIIVFSKNFHTSSWCLKELEHIMKCRRNYGQVVVPVFYHVDPSVLRHHTGDFGEVLQETATKSSSGWARRNFVLSTWKIALTEVANISGWHTKNFRDDVELTSQIVKDVKIKRNKILLNITEFPVGLGTRVHKVIHFIENQSSKVCLIGIWGMGGLGKTTTARAIYNKFQCKFVDHSFIANIRHVCEESGEGIIHLQEQLLANILKTNEKIYDTASGITKIKDAFMGKKALIVLDDVSTSEQIEALCGNRKCFGSGSVLIVTSRDVRILKLLKVDRIYSIKEMDENKSLKLFSWHAFGEPRPKRDFGDLSKSIVNYCGGLPFALKTIGDKLRDRPKQEWISELSKLEKIPNYQVLKKLEISYDGLKEDHEKSIFLDICCFFIGKERAYVSEILDGCQLHAGAGVPILIERGLLKVEKNNKLGMHDLLRDLGREIVHKRSMEEHGNHRRLWFHEDAHKVLTENTGTKTVEGLVLTSQSTNSVDINTTFKEMKNLRLLQLDRVGLTGDFKSLSQELRWLHWQGFTRECIPDEFYLGKLVVFELEHSNIKQVWKETKLLENLKILNLSHSNDLKSTPDFSKLPNLEKLIMEDCPNLSELHPSIGDLKNILLINLKDCTSLSNLPEKIYQLTSLTTLILSGCSKIDKLEEGIVQMKSLTTLIIKDTGFQQPYSIVRLESIRYISLCGSERTSDVFHQVRDMLLSLMPPSGNMASSLAPINVQNNNSGFLSPIESFSQLRTVWIQCHSEIQLTQEFGRILDDQASQISNRSTKSLLFRMASCHLAIDKSISQGLTSNGSSNFFLPVANHSSWLACIGEGPSALFQVPKNIDCDMEGIILRVVYSSKSENIGDDGFAGVLIINYTKCTIHIYKRDTVMSFNGEDWKNVTSNLGPGDDVKIYVAFEHGLTVEKTIVYLISGQSIVVEVDDPNMEMEPSPKPNKRMFTRRLPNRMGECVCLNQHTDIGLGACLCLNHNTDG*	1041

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g5327	1040	Pfam	NB-ARC domain	198	415	IPR002182	GO:0043531
	Mal7g5327	1040	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	15	980	IPR044974	GO:0006952
	Mal7g5327	1040	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	177	444	IPR027417	-
	Mal7g5327	1040	PRINTS	Disease resistance protein signature	291	305	-	-
	Mal7g5327	1040	PRINTS	Disease resistance protein signature	384	398	-	-
	Mal7g5327	1040	PRINTS	Disease resistance protein signature	621	637	-	-
	Mal7g5327	1040	PRINTS	Disease resistance protein signature	214	229	-	-
	Mal7g5327	1040	SMART	till_3	11	154	IPR000157	GO:0007165
	Mal7g5327	1040	ProSiteProfiles	TIR domain profile.	10	180	IPR000157	GO:0007165
	Mal7g5327	1040	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	15	980	-	-
	Mal7g5327	1040	SUPERFAMILY	L domain-like	546	808	-	-
	Mal7g5327	1040	Gene3D	-	184	344	IPR027417	-
	Mal7g5327	1040	Gene3D	Ribonuclease Inhibitor	505	811	IPR032675	-
	Mal7g5327	1040	ProSiteProfiles	Leucine-rich repeat profile.	625	647	IPR001611	GO:0005515
	Mal7g5327	1040	Gene3D	-	349	433	IPR042197	-
	Mal7g5327	1040	SUPERFAMILY	Toll/Interleukin receptor TIR domain	1	157	IPR035897	-
	Mal7g5327	1040	Gene3D	-	6	183	IPR035897	-
	Mal7g5327	1040	SUPERFAMILY	"Winged helix" DNA-binding domain	421	526	IPR036390	-
	Mal7g5327	1040	Pfam	TIR domain	12	183	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g5327	Mal-Chr7	123047462	123051305	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g5327	192	741	WRKY Transcription Factor Family	AT5G45050	30.846	8.53e-73	261

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g5327	-		-	mtr:MTR_8g037235	1144.41