LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g5302	ATGGCTTCCTCCATACTCCTTCCCTTTCTCCTATACTCACTAATTCTTCAATCCATCAGTGTTTTAGCTCAAACCAAAAGCACCATAGACATTGGTGATTCCTTTACTGCACAAACCAGCAACTCTACATGGTTGCTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTTCCACTTGAAGACACTGACTTTTTTTTGCTTTCCATTTGGTATGCAAAAATTCCTGACAAAACCGCTGTCTGGTATGGTAATAGAGACATTCCTGCACCAAAAGGATCAAAAGTTGAACTCAGTGCCAACGATGGGTTGGTGCTAACTTCTCCAAATGGTGACCAGTTATGGATTACTGAGGGACTCAGTGCTGGAGTTTCTCGCGGTGTGTTAAATAATACTGGCAACTTTGTGCTTGAGGATGGTGAATTCAGAAGTCAGTGGGAGACTTTCAAGTCTCCTAGTGACACCTTGTTGCCTTCTCAGTTTCTTCAAAAAGGTGGAAAGCTTTCTTCAAGGCTTAAGGAGTCAAATTTCAGTAAAGGAAGGTTTGAGCTTCTTTTAAAAGATGATGGTAATCTTGTTATGCATTCTATTAATTTACCATCTGGTAATGTTAATGAAAACTATTATGAAAGTGAAACAGTTGAGTCCAATACATCAAGTGCTGGAACTCAATTGGTCTTTGACAGATCAGGGTACTTGTATGTCTTGGGAGAGAACAATGAGAAATACAATGTGTCAAAAGAAGAGAGTGAAGTCTCTACCACACAATTTTATCTTAGAGCAACTCTTAATTTTGATGGAGTGTTCACACTTTACAAGCATCCAAAGAGTTTAATTGAGAGTGAAGGTTGGACCATAGTGTGGTCTAAGCCTGATAATATATGTGATTATATTGCTACTGGAGGGAGTGGTGTTTGTGGATATAATAGCTTCTGCACTTTGGGAGATAATAAGAGACCAATATGTCAGTGTCCAAAGAGTTACTCAGTTGATCCTGATGATCTAGATGGTAGTTGCAAGCCAGATTTCATACAAGGATGTGCAGCAGATGAACTAAGTAAAAAAAGAAATGATCTCTATGACTTTGAGATTTTGATTGACACTGATTGGCCTCTATCAGATTATGTGTTTCAAAAGCCTTTTACTGAACAACAATGTAAGGATGCTTGTATGGAAGATTGTTTTTGTTCTGTGGCTATTTTCAGGTTAGGTGATAGTTGTTGGAAGAAGAAATTACCACTCTCAAATGGGAAAGTTGACAAAACTCTCAATGGTGCTAAAGCCTTCTTCAAAGTGAGAAAAGATAATACATCCCTTGTTCCTCCAGATCCAATCATAGTGAACAAGAATAATAACAGAGAAACTTTGGTTTTGGTTGGTTATGTGCTTTTGGGTAGCTCTACTATTCTCAATGTTGTATTGATTGTAGCAATATGTTTTTGTACCTCCTTTATTTTTCAGTACAAGAAGAAGCTTAGAAGAGTTAGCAAAAATGACTCTAGTGTTGAAATTGAATCCAATTTGCGTTGCTTCACTTATGAAGAGCTCGAAGAAGCTACCAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCAACAACAACACAACTTCCAAAACTCGCGTGGCGGTGAAAAAGTTGAACAGTTTTATGTTGGATCAAGCTCATAGGGAATTCAGGAATGAACTGAATGTCATTGGTCTCACTCATCACAAGAACTTGGTTCGTTTACTTGGATTTTGTGAGGGTGGAAGGGAAAGATTGCTTGTTTATGAGTACATGAGCAATAGCACTTTGGCAAGTTTTCTTTTCAATGAAGAGAAACAGAAGCCAAGTTGGAAACTAAGGCTAGAACTTGCAATAGGAATAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATCACTAGGATCATCCATTGTGACATAAAGCCTCAGAACATACTTCTTGATGATTACTTCAATGCAAGAATTTCTGACTTTGGATTAGCCAAGTTGTTGAACATGAATCAAAGCAAAACCAACACTGGCATAAGAGGAACAAAAGGGTATGTAGCACTTGAATGGTTTAAAAACATGCCTATAACAGCTAAGGTGGATGTGTATAGTTATGGTGTAGTGCTACTTGAGATAATCTCATGTAGAAAATGTGTTGAAGAAATGGATCAAGAAGATGAAGACAAAGCAATTTTAACTGATTGGGCTTATGATTGCTACAAAGATGGTGCTGTAGATGCATTGGTTGAGGGTGACAATGAGGCATTGGCGGACAAGGAAAAGTTGGAGAAATTGGTAATGATTGCTATTTGGTGTGTTCAAGAGGATCCATATCTTAGACCAACCATGAGAAATGTGGTACATATGCTTGAAGGTACTGTTGAAGTGCAAGTTCCACCGTACCCCTCACCAATTAGTATTCAATATTCTATAAATTAG	2457	0.3814	MASSILLPFLLYSLILQSISVLAQTKSTIDIGDSFTAQTSNSTWLLSPSGDFAFGFLPLEDTDFFLLSIWYAKIPDKTAVWYGNRDIPAPKGSKVELSANDGLVLTSPNGDQLWITEGLSAGVSRGVLNNTGNFVLEDGEFRSQWETFKSPSDTLLPSQFLQKGGKLSSRLKESNFSKGRFELLLKDDGNLVMHSINLPSGNVNENYYESETVESNTSSAGTQLVFDRSGYLYVLGENNEKYNVSKEESEVSTTQFYLRATLNFDGVFTLYKHPKSLIESEGWTIVWSKPDNICDYIATGGSGVCGYNSFCTLGDNKRPICQCPKSYSVDPDDLDGSCKPDFIQGCAADELSKKRNDLYDFEILIDTDWPLSDYVFQKPFTEQQCKDACMEDCFCSVAIFRLGDSCWKKKLPLSNGKVDKTLNGAKAFFKVRKDNTSLVPPDPIIVNKNNNRETLVLVGYVLLGSSTILNVVLIVAICFCTSFIFQYKKKLRRVSKNDSSVEIESNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINNNTTSKTRVAVKKLNSFMLDQAHREFRNELNVIGLTHHKNLVRLLGFCEGGRERLLVYEYMSNSTLASFLFNEEKQKPSWKLRLELAIGIARGLVYLHEECITRIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSKTNTGIRGTKGYVALEWFKNMPITAKVDVYSYGVVLLEIISCRKCVEEMDQEDEDKAILTDWAYDCYKDGAVDALVEGDNEALADKEKLEKLVMIAIWCVQEDPYLRPTMRNVVHMLEGTVEVQVPPYPSPISIQYSIN*	819

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g5302	818	SUPERFAMILY	alpha-D-mannose-specific plant lectins	65	211	IPR036426	-
	Mal7g5302	818	Gene3D	Transferase(Phosphotransferase) domain 1	601	804	-	-
	Mal7g5302	818	SUPERFAMILY	Protein kinase-like (PK-like)	497	809	IPR011009	-
	Mal7g5302	818	Gene3D	-	151	281	IPR036426	-
	Mal7g5302	818	Pfam	D-mannose binding lectin	78	161	IPR001480	-
	Mal7g5302	818	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	645	657	IPR008271	GO:0004672\|GO:0006468
	Mal7g5302	818	ProSiteProfiles	Bulb-type lectin domain profile.	31	149	IPR001480	-
	Mal7g5302	818	ProSitePatterns	Protein kinases ATP-binding region signature.	526	553	IPR017441	GO:0005524
	Mal7g5302	818	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	5	813	-	-
	Mal7g5302	818	Gene3D	-	22	150	IPR036426	-
	Mal7g5302	818	Pfam	Protein tyrosine and serine/threonine kinase	522	796	IPR001245	GO:0004672\|GO:0006468
	Mal7g5302	818	SMART	blect_4	36	151	IPR001480	-
	Mal7g5302	818	CDD	STKc_IRAK	526	798	-	-
	Mal7g5302	818	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1	5	813	-	-
	Mal7g5302	818	SMART	serkin_6	520	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal7g5302	818	Gene3D	Phosphorylase Kinase; domain 1	492	600	-	-
	Mal7g5302	818	PIRSF	SRK	1	818	IPR024171	GO:0004674
	Mal7g5302	818	ProSiteProfiles	Protein kinase domain profile.	520	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal7g5302	818	CDD	B_lectin	39	151	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g5302	Mal-Chr7	122567532	122569988	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g5302	506	808	Receptor kinase-like Gene Family	AT1G60800	39.688	7.18e-71	241

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mal7g5302		PK_Tyr_Ser-Thr	1.4e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g5302	-		-	mtr:MTR_8g011410	1372.84