Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5260 ATGGCGCCAGAAAAGAAAAAATCTTCAGAAGGAAAAGAAAAGGTTGAATCAACAAGCGAAGAAGAATTTGATTATCTAACAATTCGAATTGTGTTTGACGACCCCGATGCAACAGAGAGTTCAAGTGATGAACGAGTTCGAAAAACTAATGACTCAAAGCCCTTAGCACCTAAGAGAAGTATGTGCGAGGTAGTGGGTCTAAAATCAAAAATAGTTGAGAAGCTTCCTCTCAAAGAGAGATGGTGGAAAATGTTTTCCACAAGCCTTTACAAAGGTGTTCGGCTCCGCCGTGGGAAAAAGAAAAGATATTTAGCTCAGATTAGAAATCCATTTGATAAGAAAACTGAGCACCTTGGTACTTATGATACCGAATATGAAGCTGCTTTGGCTTTTCGCAGAAAGAGTAAGGAGTTCCAAAAAAAAAAGTTAGCTGATTCTTCATCATCGCGTTCGAACGATGACAAACAAGAGGAGGAAGTTGCACCGCCATTGGGCGATTTTGTTCTTAATCAATCTTGCAAGGAACAAGAGAAAGGGTATGATCCCTCTGATGATGACGACGACGATGATGATAACATTGGAGGTGGTAGTTCACACCAAAATATTATTGATGTTAGAGCAGTGTAA 627 0.3971 MAPEKKKSSEGKEKVESTSEEEFDYLTIRIVFDDPDATESSSDERVRKTNDSKPLAPKRSMCEVVGLKSKIVEKLPLKERWWKMFSTSLYKGVRLRRGKKKRYLAQIRNPFDKKTEHLGTYDTEYEAALAFRRKSKEFQKKKLADSSSSRSNDDKQEEEVAPPLGDFVLNQSCKEQEKGYDPSDDDDDDDDNIGGGSSHQNIIDVRAV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5260 208 MobiDBLite consensus disorder prediction 138 208 - -
Mal7g5260 208 MobiDBLite consensus disorder prediction 1 20 - -
Mal7g5260 208 SUPERFAMILY DNA-binding domain 88 139 IPR016177 GO:0003677
Mal7g5260 208 PANTHER OS01G0224100 PROTEIN 27 160 - -
Mal7g5260 208 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 160 - -
Mal7g5260 208 MobiDBLite consensus disorder prediction 36 54 - -
Mal7g5260 208 Gene3D AP2/ERF domain 89 145 IPR036955 GO:0003700|GO:0006355
Mal7g5260 208 ProSiteProfiles AP2/ERF domain profile. 89 149 IPR001471 GO:0003700|GO:0006355
Mal7g5260 208 MobiDBLite consensus disorder prediction 34 58 - -
Mal7g5260 208 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5260 Mal-Chr7 121874854 121878575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5260 86 161 AP2-EREBP Transcription Factor Family AT1G49120 39.286 7.36e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g5260 AP2 0.0001 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5260 - - cam:101510667 90.1225