Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5253 ATGCTTCATAACGAGATCTCAAAAAATTGGGAGGTGGGTTCATCTTCCATGAGTTGCGCTAATAATAAGCGCAATAAACGCAAAAATGAAGACAACATCAATGAGAAGTCCTTGGATTTTCCATGCGACTATTGCGACAGACGGTTTTCTTCTAAGCAAGCTAGAGGAGGACATATAAAAGTTCATAAGAAGCCGCGTGCACTCAAAGTAACAATGAAGGATGAAAAGTTGTCGGACTCGATAACTTTTACGTGCAACTCATGCAAGAAAAAGTTTAATTTCTCAGAAGTTTTAGAGGAATACCAAAATGCTCCCGAGCTTAAGCCTGTACTTACAAAACTTCACCATCCTATAGACATTGATTTGTCTCGTGGGACCCGTGATAAACCTATTGAACTTGATTTATCACTTCACCTTTAA 420 0.3881 MLHNEISKNWEVGSSSMSCANNKRNKRKNEDNINEKSLDFPCDYCDRRFSSKQARGGHIKVHKKPRALKVTMKDEKLSDSITFTCNSCKKKFNFSEVLEEYQNAPELKPVLTKLHHPIDIDLSRGTRDKPIELDLSLHL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5253 139 Pfam C2H2-type zinc finger 40 65 - -
Mal7g5253 139 SUPERFAMILY beta-beta-alpha zinc fingers 40 102 IPR036236 -
Mal7g5253 139 Gene3D Classic Zinc Finger 37 104 - -
Mal7g5253 139 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Mal7g5253 139 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5253 Mal-Chr7 121740785 121741204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5253 40 99 C2H2 Transcription Factor Family AT3G53820 35.484 2.88e-07 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g5253 zf-C2H2_6 0.0001 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5253 - K09203 ola:111948189 51.2174