Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5244 ATGACTGAAGCAAAGTCGTCGGGTAAGATTATTAAGAAACAAGACACAAAAAAGCTTTCTGGTCTTGGTCGTCCGCCCTCAAAAAAGCAACATCGGAAGGGTGAAAACCCCATCCGACTCATACCTCCTCCTGACCAGGCTTCTGATTTTGGACATCCCGGCACTTGGATCTGTAAAAATGCTGCTTGTAGGGCGGTTCTATCAATGGATGACACATTTTGTAGACGGTGTTCTTGTTGTATTTGTCACCTCTTCGATGATAACAAGGATCCTAGTCTTTGGTTAGTATGCACATCTGAATCTACTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATCGAGTGTGCCCTTCAACATCAAAAAGTGGGAGTTGTTGATCATGGGCAACTGATGAAACTGGATGGCGGTTATTGTTGTGCATCCTGTGGTAAAGTTACTGAGATACTTGGATGCTGGAAGAAACAGCTAAATATTGCAAAAGATGCCCGCCGTGTAGATGTACTCTGTTATAGGATATATTTGAGCTACAGGCTTCTGAATGGAACTTCAAAATTTAAAGACCTGCATCAGATGGTACAGGAGGCAAAGACTAAACTGGAGACAGAAGTTGGTCCTCTTGATGGGGTTTCTTCCAAAATGGCACGAGGCATTGTCAGCAGACTCCCTATCGCCAGTGATATGCAGAGACTCTGTACTCTTGCTATTGAGAAAGCTGATAGCTGGCTGGCCACTGTTCCCAATTTAAACCCAGGTTCCAAAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAGCCTCCTCTGTCAAAATCATTTTAATTGAAACGTCAAATATATGTTCTGAAGACATTAAGGGGTACAAGCTCTGGTATTACAAGAGTCGGGATGAACCACACACAAAGGACCCTGTTTCTGTGTTTCCCAAATCTCAGAGGAGGATTTTGATATCCGACCTTCAACCTTGCACAGAATATACTTTTCGTATTATATCTTACACTGACATGGGTGAACTAGGTCATTCTGAGGCTAAGTGTTTCACTAAGAGCATCAAGATAATTCAAAACAATCCCTCCAAGTCTGTTGCTTCGAATCCTAAAAATCCCTCCAAGACGGAGCTCAATCCCGCAATGACAGGCCCCAGATTTAAGGTTCGAGACCTTGGGAAAATTTTGCGACTTGCTTGGGCTCAAGAGCGAGGTTACTTTGAGGAGTTTTGCTGTGCTGACATGAAAAATAGCTGTGGACAAGGCGAAATGAACAAGCCTAAAATTCCAGAAACGTGGCTGCCTTCAGATTCACGAGGCCTTGATTTAAATGTTGTTTCAGTCCCTGATTTGAATGAAGACCTAACACCTCCTTTTGAATCTTCCAGGGATGAAAGTAATGGTTGCACTTTACTGCATGCTGTTGAGGTAGATGATGACGCTGCTTCTCATGGTCTACAGAAAAATGATTTAGCAAGATCACATAGGAGTGGTGACTCACAAACCAGGGCTCATGGCCCAAGAGAAGTCACAGCTGTTGACTCTCGTGTAAATGCAGGCAGAAAAAGGGCTGCAGGTACAAATGAAGAGGCACATGACTGTGATAGCACTTTGATAAATGGTTCTCCTTTACGTATGCCTGATGGTTCGCTTTCCTTGGATGAAAACTTCGAGTATTGTGTGAAAGTAATCCGTTGGCTAGAGTGTGAGGGCCACATCAAACAGGAATTTAGGTTGAAGTTGCTAACATGGTTTAGTTTGAGATCCACAGAGCAGGAGCGCAGGGTTGTAAGTACCTTCATTCAAACTCTTATGGATGATCCAAGTAGTTTGGCAGGGCAACTGGTTGACTCTTTCACTGATATTGTATCCAGCAAGAGGCCGAGAAATGGATTCACTAGTAAAGCTGGGGCATCCAAATAA 1920 0.437 MTEAKSSGKIIKKQDTKKLSGLGRPPSKKQHRKGENPIRLIPPPDQASDFGHPGTWICKNAACRAVLSMDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESTQGDSCGLSCHIECALQHQKVGVVDHGQLMKLDGGYCCASCGKVTEILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLNGTSKFKDLHQMVQEAKTKLETEVGPLDGVSSKMARGIVSRLPIASDMQRLCTLAIEKADSWLATVPNLNPGSKEGSLPAACKFVFEEVTASSVKIILIETSNICSEDIKGYKLWYYKSRDEPHTKDPVSVFPKSQRRILISDLQPCTEYTFRIISYTDMGELGHSEAKCFTKSIKIIQNNPSKSVASNPKNPSKTELNPAMTGPRFKVRDLGKILRLAWAQERGYFEEFCCADMKNSCGQGEMNKPKIPETWLPSDSRGLDLNVVSVPDLNEDLTPPFESSRDESNGCTLLHAVEVDDDAASHGLQKNDLARSHRSGDSQTRAHGPREVTAVDSRVNAGRKRAAGTNEEAHDCDSTLINGSPLRMPDGSLSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVSTFIQTLMDDPSSLAGQLVDSFTDIVSSKRPRNGFTSKAGASK* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5244 639 CDD PHD_VIN3_plant 78 142 - -
Mal7g5244 639 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Mal7g5244 639 PANTHER VIN3-LIKE PROTEIN 1 4 634 - -
Mal7g5244 639 Pfam Fibronectin type III domain 263 342 IPR003961 GO:0005515
Mal7g5244 639 MobiDBLite consensus disorder prediction 361 381 - -
Mal7g5244 639 Gene3D Immunoglobulins 257 354 IPR013783 -
Mal7g5244 639 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 634 IPR044514 GO:0010048|GO:0040029
Mal7g5244 639 SUPERFAMILY Fibronectin type III 265 346 IPR036116 GO:0005515
Mal7g5244 639 CDD FN3 287 341 IPR003961 GO:0005515
Mal7g5244 639 MobiDBLite consensus disorder prediction 1 45 - -
Mal7g5244 639 MobiDBLite consensus disorder prediction 361 378 - -
Mal7g5244 639 MobiDBLite consensus disorder prediction 1 19 - -
Mal7g5244 639 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Mal7g5244 639 MobiDBLite consensus disorder prediction 485 502 - -
Mal7g5244 639 MobiDBLite consensus disorder prediction 485 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5244 Mal-Chr7 121651957 121654351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5244 55 633 PHD Gene Family AT3G24440 49.663 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5244 - - gmx:100816128 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5244 7 121651957 121654351 Mal8g3928 8 113797540 113801579 PCT