Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5242 ATGACAAGTCGACTAAAGGAAGATGAGAAAAATGAACGAATTATTCGAGGTCTTCTTAAACTGACACCGAATCGAAGATGCATTAACTGCAATAGCATGGGACCACAATATGTATGCACAAATTTCTGGACATTTGTTTGCACAAACTGCAGTGGAATACACCGGGAATTTACTCATCGAGTAAAATCAATTTCCATGGCAAAATTTACTGCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATATTTTTTAAAGAATGGGATCCACAAACTCAATCTTTACCTGATAGCGGTAATGTGGACAGGCTTCGGGACTTCATCAAGCATGTTTTTGTGGATAGGAGATTCACTGGTGATAGGTCCTATGACAAACCTCCAAGAGTAAAGGGCGACAAGGATGATTCCTATGAAACCAGGAGGACGGAGTCGTATCAGGGAGGACCAAAAAGCCCTCCTTATGAGGATACATATGAAAGTCGTTACAGTGACAGGTCTAGTTCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGGCATTATGCCGATCATAAGAGAAGCCCTGGTCGCCCTCCAGTAATCAATGACTGGCGTCGTGAAGATAGATTTGGAGATGGACGGAAATTTGAAGATCATCGAATATCCGATGGAGGTAATAAGATGGAAAGCCAATCTCCCGAGCGAGCCAAAGACCTGGATTCTTCTAGTCCACTACCTGTTGTCCGACCTGTTAGAGAAATTTTGGGAGAAAATGTAGTACCTCTGCGAATTAGTGAACCTCCCAAAGCAAACAGTGGGCAGGCTGCTAATGGATCAGCACTCGCACAGAGAACGGCATCTTCGAGTAGCTTGGCATCCAGCAATGGAACCCCATCAGAAGTTAAGCTTGAGACTATCAGGAGCCTTATTGATTTTGATGATGTTCCTGAACCACCTATTGCTTCAGCAATTCCTCAAGCCACACAAACTACCGTGGCTCAAATTGTGAATCCAACAAATTCTGGGGATAACAATTGGGCCTCCTTTGATGTTGCACCTGAGGTAACAGTATCTCAGGGCCTTTCAAATGTAAATCCACTTGAATCTATGCTGTCCCAGTTGTCAGTTCCATCATCTTTACCTGCTCAAGTTTCTGGAGCCCAAGGGCTTTTTGCGGGATCAGCTCTTACTACTACTGCCGGAGCTCCAACTGTGAGCAGCTTCACAACATTCCCATCCAGTGTTGCTTCATTAACATCTTCTGGATTGACAATGGAATCACCTTTCAATAATGCAGCCCCGTGGCCTAATTTGCAGTATCAGCAACAGCAACCGTTGTTCACATCTACTGTTGGTCAGCCTACTATTCAACAATCTACACCACCAGTAGGTGGAGCTTTGAATAATCAGGGGAATCCAAGCACACCATTGCCACATTTCTCAAAGGTTGTTAATGAGGAAAAATCTAATGTTGCTTCACAAACTTCTACTGCAGACATAAAACCAAGTGGAAGAAATGAACTTCCTGAGGATCTATTCGCTATGAAATATTCATCCTTCCCTGCTCCAGTCCCAGGCTGGCAAATGGGTGCACCGCCTGGCATGGGTGTCTATGTTCAATATAATAATGCGATGTCCATGTCGAGTTTCCCACAACCATCACAATCTTCAAATCCATTTGATGTGATCAACGAACCAACTCCAGTTCAAGCCCCAACCTTTCCTTCTATGTCATCTTTGCAAGGTGCTCTGCCTAGTGTTACACCTTCAGCTACATTACACCCTTCAAACATGGGTAGTCAATATTTTTCCTGGAATCCACCCTCCTCGGTATCATATGCACCAATGCTGCCTCCACAAGCACATACTCATGCCTCAGCAATGGAACCAAGGGCATACATGGAGCAACAAATGCCAACTAACGTGCCAATGCCGAGGCATCAAGGAATGGGAAATTTTGGCGCCGGGGGAGCTGCTTTTGGCTTCTCTAATATAGATCAGCAACAGAATGGTAGGTTGTCGGCCCCTGCTACCCTAAACCCCTACCCTGCAGGAGGTAATCCGTTCGGATGA 2067 0.4475 MTSRLKEDEKNERIIRGLLKLTPNRRCINCNSMGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTAQEVSALQEGGNQRAKEIFFKEWDPQTQSLPDSGNVDRLRDFIKHVFVDRRFTGDRSYDKPPRVKGDKDDSYETRRTESYQGGPKSPPYEDTYESRYSDRSSSGGRSPGYDQERHYADHKRSPGRPPVINDWRREDRFGDGRKFEDHRISDGGNKMESQSPERAKDLDSSSPLPVVRPVREILGENVVPLRISEPPKANSGQAANGSALAQRTASSSSLASSNGTPSEVKLETIRSLIDFDDVPEPPIASAIPQATQTTVAQIVNPTNSGDNNWASFDVAPEVTVSQGLSNVNPLESMLSQLSVPSSLPAQVSGAQGLFAGSALTTTAGAPTVSSFTTFPSSVASLTSSGLTMESPFNNAAPWPNLQYQQQQPLFTSTVGQPTIQQSTPPVGGALNNQGNPSTPLPHFSKVVNEEKSNVASQTSTADIKPSGRNELPEDLFAMKYSSFPAPVPGWQMGAPPGMGVYVQYNNAMSMSSFPQPSQSSNPFDVINEPTPVQAPTFPSMSSLQGALPSVTPSATLHPSNMGSQYFSWNPPSSVSYAPMLPPQAHTHASAMEPRAYMEQQMPTNVPMPRHQGMGNFGAGGAAFGFSNIDQQQNGRLSAPATLNPYPAGGNPFG* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5242 688 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Mal7g5242 688 MobiDBLite consensus disorder prediction 181 234 - -
Mal7g5242 688 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Mal7g5242 688 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Mal7g5242 688 CDD ArfGap_AGFG 12 122 - -
Mal7g5242 688 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Mal7g5242 688 PANTHER ARFGAP/RECO-RELATED 1 688 IPR044820 GO:0005096
Mal7g5242 688 MobiDBLite consensus disorder prediction 268 298 - -
Mal7g5242 688 MobiDBLite consensus disorder prediction 125 245 - -
Mal7g5242 688 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Mal7g5242 688 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Mal7g5242 688 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Mal7g5242 688 PANTHER ARF GTPASE ACTIVATOR 1 688 - -
Mal7g5242 688 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Mal7g5242 688 MobiDBLite consensus disorder prediction 125 146 - -
Mal7g5242 688 MobiDBLite consensus disorder prediction 263 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5242 Mal-Chr7 121619074 121625860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5242 12 122 C2H2 Transcription Factor Family AT4G21160 30.769 1.08e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5242 - - gmx:100815114 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5242 7 121619074 121625860 Mal7g5242 7 121619074 121625860 ECH