Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5216 ATGGAGCCGGGTCGTGCAACCAAGAGTTGGAGCATCCATACCCGATCGGAGATCATCGCCAAGTACCAAGTCATGGAACGCATCGGCTCCGGAGCTTACGCCGACGTCTACCGTGGCCGTCGTCTCTCCGACGACCTAACAGTCGCTCTCAAAGAAATCCACGACTACCAGTCCGCATTCCGAGAAATCGAAGCGTTGCAGATGCTTCAAGGTTCTCCAAACGTCGTCGTTTTGCACGAATACTTCTGGCGCGAAGACGAAGACGCCGTTCTCGTTCTCGAGTACCTCACCACTGATTTGGCCACCGTCATTTCCAATGCTGCAAAGGAAGAGATTCCAATTCCTGTTGGTGAGATGAAGCGTTGGATGATTCAGATTCTTTGTGGACTTGATGCTTGTCATAGGAATATGATTGTTCATCGTGATTTGAAGCCTTCTAATCTCTTGATTTCTGATTGTGGTGTTCTCAAATTGGCTGATTTTGGGCAGGCGAGGATACTCACAGAGCCTGGATTTGATGCTTTTGAGGAGAATCCACCACCTTGTGAGAATGATGGTTCTAATCATGAAAGTTCACTTCATCATCCCGAAGCTTTTCCTCACAACGACAACTCAAGCCAATTTGGATGTGGAACTGGAAATCAAGAGCAGGGAAGCACTCATGAAGAGTATTTTAGCGTTTTAGATGAGCTGAAAACAAAGAGATCTGTGAATGACATTGATAAGGATACAAACATTACAGATGGAAATACTTCTTGTCTTGCAACGTGCACAACAAGTGATATGGATAATGATCCTATGAGAACTTCTTTTAGTTATGAAGCAATGGAGGGGGAAGATAAAGAACGTGGTTGTTTCACATCATGTGTTGGAACTCGCTGGTTCCGGGCTCCTGAATTGCTTTACGGATCCGCAAACTATGGTTTAGAAATTGACCTCTGGTCACTTGGATGCATTTTTGCTGAGCTCCTGACTCTTAAGCCCTTATTTCCTGGAACGGCTGATATTGACCAGCTCAGTAGAATTATTAATGTTTTGGGCAACCTTGATGAGAGTGCTTGGTCTGGTTGTTCAAAACTTCCTGATTACGGAATAATCTCGTTTAGCAAGGTAGAAAACCCTGCTGGTGTTGAAGCCTACCTCCCCAACCGCTCCCCCGATGAAGTGTCTCTAGTAAAAAAACTGGTTTGTTATGATCCGTCTAGGAGGGCTACAACAATGGAGCTACTCCATGACAAGTACTTTAACGAAGAACCTCTTCCTGTTCCCGTTTCTGAGTTGCGAGTTCCTTTGACCAGAAATACAGAAGATGAGGATTCTGTTGGTGTGTGGCAGGATTACAATGACATGGGTTCCGATTCTGATTTTGATGACTTTGGCCCTGTGAATATCACCAGAACTGGTACCGGTTTCTCTATACAGTTTCCTTGA 1431 0.4514 MEPGRATKSWSIHTRSEIIAKYQVMERIGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSPNVVVLHEYFWREDEDAVLVLEYLTTDLATVISNAAKEEIPIPVGEMKRWMIQILCGLDACHRNMIVHRDLKPSNLLISDCGVLKLADFGQARILTEPGFDAFEENPPPCENDGSNHESSLHHPEAFPHNDNSSQFGCGTGNQEQGSTHEEYFSVLDELKTKRSVNDIDKDTNITDGNTSCLATCTTSDMDNDPMRTSFSYEAMEGEDKERGCFTSCVGTRWFRAPELLYGSANYGLEIDLWSLGCIFAELLTLKPLFPGTADIDQLSRIINVLGNLDESAWSGCSKLPDYGIISFSKVENPAGVEAYLPNRSPDEVSLVKKLVCYDPSRRATTMELLHDKYFNEEPLPVPVSELRVPLTRNTEDEDSVGVWQDYNDMGSDSDFDDFGPVNITRTGTGFSIQFP* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5216 476 SMART serkin_6 22 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g5216 476 Pfam Protein kinase domain 22 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g5216 476 Pfam Protein kinase domain 283 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g5216 476 PANTHER CYCLIN-DEPENDENT KINASE 10 14 434 - -
Mal7g5216 476 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Mal7g5216 476 MobiDBLite consensus disorder prediction 174 218 - -
Mal7g5216 476 MobiDBLite consensus disorder prediction 198 218 - -
Mal7g5216 476 PANTHER CELL DIVISION PROTEIN KINASE 14 434 - -
Mal7g5216 476 ProSiteProfiles Protein kinase domain profile. 22 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g5216 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mal7g5216 476 SUPERFAMILY Protein kinase-like (PK-like) 10 439 IPR011009 -
Mal7g5216 476 Gene3D Transferase(Phosphotransferase) domain 1 279 421 - -
Mal7g5216 476 Gene3D Transferase(Phosphotransferase) domain 1 11 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5216 Mal-Chr7 121341184 121343501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5216 9 476 Core Cell Cycle Gene Families AT4G28980 63.080 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Mal7g5216 Pkinase 4.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5216 - - mtr:MTR_8g103240 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5216 7 121341184 121343501 Mal7g5216 7 121341184 121343501 ECH
Mal7g5216 7 121341184 121343501 Mal8g3992 8 115282916 115285496 PCT