Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5210 ATGTCTGTGCCAGTGGAACAAGGCTATGGTGGTTTGCAAGAGGTGGAAACCAAAGAGAGAAGCATTGGGTTGAACCTCAAAGCTACTGAACTGAGGCTAGGGTTACCTGGCTCTGAATCACCAGAGAGAGAAAATGGTGGTATGGTTAAGAGTTTGGTGTCTGGTGCTAAAAGGGGTTTCTCTGATGCTATTATTGATGGAGGTGGTTCTGGGAAATGGGTTTTGTCTGGAAATGGTGGATCTGAAGTGGGGTTGTGTAAAGATGCTAACTTGTTCTCTCCTAAAGGTAAAGGTGTTGTTGAATGCAACAACCAACAAAACCCTTTCTCTACTTCAGTTGGTGTTAAAGAAACTGTTTCACACTCTCCCAAGCCTTTGCATGATAACAAACCACAAGTTTCTCCTCCTTCTGCAAAGGCGCAAGTTGTAGGATGGCCACCAATCCGATCTTTCAGGAAGAACTCAATGGTTACTCAGCCTCAAAAGAATGATGCTGATGCAGAAGCCAAATCTGAATGCCTTTATGTAAAAGTCAGCATGGAAGGAGCCCCATACTTGAGGAAAGTGGATCTGAATGGTTTCAGCTCTTACCGAGAACTATCTTCTGCACTCGAAAAGATGTTCAGTTGTTTTACAATCAGTCAATGTGGCTCGTACGGGGTTTCATGTCGAGAAAAAAATTTAAGTGAAAGCAGATTGGTGGATCTCCTTCATGGATCGGAATATGTGCTTACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCATGGGAGATGTTCACTGAGTCTTGCAAGAGGTTGAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCACCTCGAGCTATGGAAAAGTGCAAAAGTCGCAACTAG 885 0.4373 MSVPVEQGYGGLQEVETKERSIGLNLKATELRLGLPGSESPERENGGMVKSLVSGAKRGFSDAIIDGGGSGKWVLSGNGGSEVGLCKDANLFSPKGKGVVECNNQQNPFSTSVGVKETVSHSPKPLHDNKPQVSPPSAKAQVVGWPPIRSFRKNSMVTQPQKNDADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSCREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAMEKCKSRN* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5210 294 Gene3D - 167 288 - -
Mal7g5210 294 SUPERFAMILY CAD & PB1 domains 171 275 - -
Mal7g5210 294 Pfam AUX/IAA family 29 285 IPR033389 -
Mal7g5210 294 PANTHER AUXIN-INDUCED PROTEIN 13 287 - -
Mal7g5210 294 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 287 IPR003311 GO:0005634|GO:0006355
Mal7g5210 294 MobiDBLite consensus disorder prediction 116 140 - -
Mal7g5210 294 ProSiteProfiles PB1 domain profile. 173 276 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5210 Mal-Chr7 121251122 121254051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5210 176 284 B3 DNA Binding Superfamily AT4G23980 31.193 3.57e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal7g5210 AUX_IAA 1.3e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5210 K14484 - gmx:100803754 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5210 7 121251122 121254051 Mal7g5210 7 121251122 121254051 ECH
Mal7g5210 7 121251122 121254051 Mal8g4006 8 115535111 115538160 PCT