Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5194 ATGGGTGAGTGTGAGATATCTCTACCTAACTCACAGAAAGAACCTAAAACTTCATCTTCGGAGCCTCATTTATCCGACCCAAATGAGAAACGGTCCAAACGACCCAGAGAGAGCAACCACCCGGTTTACAGAGGAGTCCGAATGCGAGCATGGGGTAAATGGGTATCCGAAATCCGCGAACCGAGAAAGAAGAATCGGATCTGGCTAGGAACGTTCGCCACGCCGGAGATGGCTGCTAGAGCCCATGACGTGGCAGCTCTCGCCATCAAAGGCAACTCCGCCATACTCAACTTCCCGGAACTCGCCGCTTCAATGCCCCGACCCGATTCAAACTCTCCCCGTGATGTTCAAGCTGCCGCTGTTAAAGCCGCTGCCATGGAAGTTCCCGATCAACAAACATCATCATCATCTTCGCCGTCTTCATCTTCTTGTTCGTTGGCGGTTTCTTCCTCCGACGAACCTTCAACACCAGATGAACTTGGAGAAATAGTGGAACTACCAGCATTGGGAACAAGTTTTGAATTACCCGACCCGTGTAATATGGTATTTTCCGACCCGATTGATGGATCATGGCTTTATTCACACTACTGTTGGTATAATAACAGCATTTACGATGAAAGGGATTATTATTTTATGGAGGATCAGATTTCAATGCAGAAGCAGCAACAAGACAGCTCTGAAAGTATTACGACTAGTATGATACTTTGTGGTTTTGAGGGTACTTCTTCTTTGTGGCAACATTAA 744 0.4704 MGECEISLPNSQKEPKTSSSEPHLSDPNEKRSKRPRESNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAASMPRPDSNSPRDVQAAAVKAAAMEVPDQQTSSSSSPSSSSCSLAVSSSDEPSTPDELGEIVELPALGTSFELPDPCNMVFSDPIDGSWLYSHYCWYNNSIYDERDYYFMEDQISMQKQQQDSSESITTSMILCGFEGTSSLWQH* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5194 247 MobiDBLite consensus disorder prediction 19 42 - -
Mal7g5194 247 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Mal7g5194 247 MobiDBLite consensus disorder prediction 128 156 - -
Mal7g5194 247 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 12 224 - -
Mal7g5194 247 MobiDBLite consensus disorder prediction 1 42 - -
Mal7g5194 247 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Mal7g5194 247 MobiDBLite consensus disorder prediction 105 159 - -
Mal7g5194 247 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Mal7g5194 247 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mal7g5194 247 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Mal7g5194 247 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Mal7g5194 247 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 224 - -
Mal7g5194 247 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Mal7g5194 247 CDD AP2 43 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5194 Mal-Chr7 121152704 121153447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5194 4 199 AP2-EREBP Transcription Factor Family AT5G11590 55.340 6.76e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g5194 AP2 4.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5194 K09286 - gmx:100778201 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5194 7 121152704 121153447 Mal7g5194 7 121152704 121153447 ECH