Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5180 ATGGCGAAGCAGCTTCCTTGTGACGCCGATGGCGTTTGCATGGTGTGTAAAAACAAGCCTCTAGAAACCGAAACCCTTCATTGTCGAACATGCACTACTCCATGGCATGTTCCGTGTTTACCCCTCGTTCCAACCTCAATCCTCGATTGGGAATGCTCCGATTGTTCTCAACCCGTCGCCGGCGATTCCGCTGCTCCGTCTGTCGCCGGAGATCTCGTTTCCGCCATCCGCGCTATCGAGAACGATGATTCACTTACCGATGAGGAAAAAGCGAAGAAACGGCAAGAGCTCGTTGGTGGATCTTCTACTGAAACCATCAACACGCGCAGAAATGGTTTGCTTGATATCTTCGATGGTAGCCTTAACTGTTCCTTCTGCATGCAGTTGCCTGAGAGACCCGTCACTACACCATGTGGGCACAATTTCTGCCTGAAGTGTTTTGAGAGATGGATTAAGCAAGGAAAACGAACATGCTCGAATTGTAGGACTGCAATTCCAGCAAAAATGGCAAGTAATCCGCGAATCAACTCACAATTGACGATGGCTATTCGTATGGCAAAGCTAGCAAGATCAGAGGGTGTTGGAGGAAGTAGTGCTCCGAAAGTTTATCATGTTGTTCACAATGATGAACGTCCTGACACCGCTTTCACCACAGAGAGAGCAAAGAAAACAGGGAAGGCAAATGCTTGCAGTGGGAAGATATTTGTCACTATTCCGAAAGATCATTTTGGACCGATTGTTGCTGACAATGATCCAACAAGGAACCGTGGGGTTCTTGTTGGTGATACATGGGAAGATAGGATGGAATGCAGACAATGGGGGGCCCATTTTCCCCATGTTGCAGGGATTGCTGGTCAGAGTACGCATGGTGCACAATCTGTTGCTCTTTCGGGTGGTTATGTCGATGACGAGGATCATGGTGAATGGTTCCTCTATACCGGAAGTGGTGGTAGGGACCTCAGTGGCAACAAACGTACGAACAAAAACCAGTCTTTTGATCAGCAGTTTGAGAACATGAATGAGGCTTTGAGATTCAGTTGTCGAAAAGGTTATCCTGTTCGAGTTGTTAGGTCCCACAAGGAGAAACGTTCCGCTTATGCACCGGAAGCAGGAGTGAGATATGATGGGGTTTATAGAATTGAGAAATGCTGGCGCAAAATTGGAATACAAGGTCATAAGGTTTGCAGGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTATCCGGAGACCGTCCCCGTCCACTACCTATAATTAAGGAGTTTAAGGGTGCAATTGATATTACTGAAAGAAAGGGTGATCCATCATGGGACTTTGATGAGGAAAAGGGATGTTGGTTATGGAAGAAGTCTCCACCGCTAAGTAAGAAGCCGGTGAACATTGTGGATCCTATAGATGGAAGTAAAATAAAAGTCATTCGGCCAAAAACAAAAAAGGTGTCCTTCAAAATCAAGGATAGACTATTGAAAGAGTTCGGTTGCAATATATGTCACAAGGTGTTGGCTTCGCCTCTCACTACACCTTGTGCTCACAACTTCTGCAAAGCTTGCCTTGAGGGTGCCTTTTCTGGCCAAAGTTATATTAGGAATAGGGCATCTCAAAGTGGACGCTCTTTGCGGACACAAAAGAACATTATGAAATGCCCTACTTGTTCAACTGACATAGCTGATTATCTTCAGAATCCACAGGTAAACAGGGAAATGATGGGTGTCATAGAGTCACTCCAGCAACAGGCTGAACAGATTGAGAGTTCTGAAGAATCAAGTGCCAAAAGTGACGAAAATCTCAAGCCGGATGAGGAGACAGAGGTTTCAAAGCCCTGTGATTCAAGTGAAAAAGTCTTGAAGGAAATTAACGAGAATGATCTGGATCCTCCACAGAAGCGGAGGAAAGGTGCCGGTGGCAAGGCTGTGGTGAACGCGGAGGAACATTTGGATGAGGCAGAAGTAGAAAGCAAAGCAATGGCTTTCAATTAG 1992 0.4593 MAKQLPCDADGVCMVCKNKPLETETLHCRTCTTPWHVPCLPLVPTSILDWECSDCSQPVAGDSAAPSVAGDLVSAIRAIENDDSLTDEEKAKKRQELVGGSSTETINTRRNGLLDIFDGSLNCSFCMQLPERPVTTPCGHNFCLKCFERWIKQGKRTCSNCRTAIPAKMASNPRINSQLTMAIRMAKLARSEGVGGSSAPKVYHVVHNDERPDTAFTTERAKKTGKANACSGKIFVTIPKDHFGPIVADNDPTRNRGVLVGDTWEDRMECRQWGAHFPHVAGIAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQQFENMNEALRFSCRKGYPVRVVRSHKEKRSAYAPEAGVRYDGVYRIEKCWRKIGIQGHKVCRYLFVRCDNEPAPWTSDLSGDRPRPLPIIKEFKGAIDITERKGDPSWDFDEEKGCWLWKKSPPLSKKPVNIVDPIDGSKIKVIRPKTKKVSFKIKDRLLKEFGCNICHKVLASPLTTPCAHNFCKACLEGAFSGQSYIRNRASQSGRSLRTQKNIMKCPTCSTDIADYLQNPQVNREMMGVIESLQQQAEQIESSEESSAKSDENLKPDEETEVSKPCDSSEKVLKEINENDLDPPQKRRKGAGGKAVVNAEEHLDEAEVESKAMAFN* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5180 663 MobiDBLite consensus disorder prediction 586 663 - -
Mal7g5180 663 ProSiteProfiles Zinc finger RING-type profile. 123 162 IPR001841 -
Mal7g5180 663 SUPERFAMILY PUA domain-like 227 423 IPR015947 -
Mal7g5180 663 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 69 IPR013083 -
Mal7g5180 663 CDD RING-HC 123 161 - -
Mal7g5180 663 SUPERFAMILY FYVE/PHD zinc finger 7 57 IPR011011 -
Mal7g5180 663 Coils Coil 570 590 - -
Mal7g5180 663 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 486 612 IPR013083 -
Mal7g5180 663 SMART G9a_1 248 405 IPR003105 -
Mal7g5180 663 Pfam RING-type zinc-finger 499 540 IPR027370 -
Mal7g5180 663 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 3 620 IPR045134 -
Mal7g5180 663 ProSiteProfiles YDG domain profile. 253 401 IPR003105 -
Mal7g5180 663 ProSitePatterns Zinc finger RING-type signature. 514 523 IPR017907 -
Mal7g5180 663 MobiDBLite consensus disorder prediction 591 656 - -
Mal7g5180 663 Pfam SAD/SRA domain 256 404 IPR003105 -
Mal7g5180 663 ProSitePatterns Zinc finger PHD-type signature. 13 55 IPR019786 -
Mal7g5180 663 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 3 620 - -
Mal7g5180 663 SUPERFAMILY RING/U-box 491 583 - -
Mal7g5180 663 MobiDBLite consensus disorder prediction 84 103 - -
Mal7g5180 663 Pfam Zinc finger, C3HC4 type (RING finger) 121 166 - -
Mal7g5180 663 ProSiteProfiles Zinc finger RING-type profile. 499 557 IPR001841 -
Mal7g5180 663 Gene3D - 224 419 IPR036987 -
Mal7g5180 663 SMART ring_2 499 556 IPR001841 -
Mal7g5180 663 SMART ring_2 123 161 IPR001841 -
Mal7g5180 663 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 189 IPR013083 -
Mal7g5180 663 SUPERFAMILY RING/U-box 115 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5180 Mal-Chr7 121050044 121053650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5180 4 590 C2H2 Transcription Factor Family AT5G39550 61.371 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5180 K10638 - gmx:100786796 952.199