Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5162 ATGGAGAAGACCATGATTCTGTCTTTTCTCCACCTCCTTCTTCTCCTTCTCCCAAATGCAGCAAAATCTTCCATTGGCATAGGCATTGGTGTTGGCATTGGCAGTGGCAATGATGATCCTAACAGTCCAGTACCTTCAGGATCATCAATGTCAAACCTAAACAATGCTTTCAAAGCTCTTCAAGCATGGAAAGCTTCAATTACTGATGACCCTTTGAAGATTTTAGACACATGGGTTGGTCCTAATGTTTGTTCTTATAAAGGAATCTTTTGTGACACTACTAGTAATACTCCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTACAAGGAACACTTGTAAAAGAACTCTCTTTACTATCTGCTATAACACTTCTCCACCTCAACACTAATAGATTTTCAGGTACAGTTCCTGATACATTCAAAGACTTTACCTTTCTTCAAGAACTAGACCTTAGCAACAACCAACTTTCTGGTTCTTTTCCTATAGTTACTTTATACATGCCAAGTTTAATTTACTTGGACCTTAGATTCAACAACTTCAAAGGGTTACTTCCTGAAGAACTTTTCAACAAGAAACTTGATGCAATATTTCTCAACAACAATCAGTTTAGTGGTGAAATACCTCAAAACTTTGGTAACTCACCTGCATCAGTGATCAATTTAGCTAACAACAAGTTGAGTGGAAACATACCATCAAGTTTTGGGTTCATGAGTCCTAAACTAAAAGAGATTCTTTTTCTTAATAATCAGTTAACAGGTTGTATACCTCAAGGTGTTGGTATATTCACAGAAATGCAGGTTCTTGATGTGAGTTACAATTCACTTGTTGGTCATTTGCCAGATACAATATCTTGTTTGCAAGATATTGAGGTTCTTAATTTGGGACATAACAATCTTTCTGGTGATATATCTGATGTGATATGTTCTTTGAGAAGCTTGTTGAATCTAACTGTTGCTTATAATTTCTTTTCTGGGTTTAGTCAAGAATGTTCAAGGCTTTTCAATGTTGGTTTTGATTTCTCTGATAATTGTATTCCTGGTAGGAATATGCAGAAACCTCAACCTGAATGTTGTGTAATCCCTGGTGGTAATTTGAATTGTCTCAGAATCCCTACTCCAAAGCCTCTTGTTTGTGGTACTTTGGCTGCAAGTACTTCTAAGTACACAAATATTCCTTCATCATCTCCATGA 1197 0.3642 MEKTMILSFLHLLLLLLPNAAKSSIGIGIGVGIGSGNDDPNSPVPSGSSMSNLNNAFKALQAWKASITDDPLKILDTWVGPNVCSYKGIFCDTTSNTPFVAGIDLNHANLQGTLVKELSLLSAITLLHLNTNRFSGTVPDTFKDFTFLQELDLSNNQLSGSFPIVTLYMPSLIYLDLRFNNFKGLLPEELFNKKLDAIFLNNNQFSGEIPQNFGNSPASVINLANNKLSGNIPSSFGFMSPKLKEILFLNNQLTGCIPQGVGIFTEMQVLDVSYNSLVGHLPDTISCLQDIEVLNLGHNNLSGDISDVICSLRSLLNLTVAYNFFSGFSQECSRLFNVGFDFSDNCIPGRNMQKPQPECCVIPGGNLNCLRIPTPKPLVCGTLAASTSKYTNIPSSSP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5162 398 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 28 397 - -
Mal7g5162 398 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Mal7g5162 398 Gene3D Ribonuclease Inhibitor 54 217 IPR032675 -
Mal7g5162 398 Gene3D Ribonuclease Inhibitor 218 337 IPR032675 -
Mal7g5162 398 PRINTS Leucine-rich repeat signature 288 301 - -
Mal7g5162 398 PRINTS Leucine-rich repeat signature 148 161 - -
Mal7g5162 398 Pfam Leucine rich repeat N-terminal domain 54 92 IPR013210 -
Mal7g5162 398 PANTHER LRR/EXTENSIN 28 397 - -
Mal7g5162 398 SUPERFAMILY L domain-like 58 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5162 Mal-Chr7 120774579 120775775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5162 52 359 Leucine-rich Repeat extension Gene Families AT3G24480 50.161 3.66e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5162 - - gmx:100786358 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5162 7 120774579 120775775 Mal7g5162 7 120774579 120775775 ECH