Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5160 ATGATGAATAAGATGAGCAACGTTAGTAGCTCTGATCTCATAGATTCTAAACTAGAAGAGCATCAGTTGTGTGGATCCAAACACTGCCCTCGTTGCGGACACAAGTTTGATCAAGGCAAACCGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAATTGATTGAACATCTTGAAGCTAAAGTTGAGTCAAAGAACATGCAGAAATCACACCCTTTGATTGATGAATTCATTCTCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCTGAAAAACTTCCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACACGAAAGAGGAGAAAGATTCAAACCGAAGAGTGTGACTTACAAGGAAGTACAGGAGGAGAAACAAGATGGCATAAAACTGGTAAGACCAGACCTGTTATGGTTAATGGAAAACAAAAAGGCTGCAAGAAAATTCTTGTCCTCTACACCAATTTCGGGAAGAATCGAAAACCCGAGAAGACGAACTGGGTGATGCATCAATACCATCTAGGACAACATGAAGAGGAAAAAGAAGGAGAGCTTGTTGTTTCAAAGATTTTTTATCAGACACAACCAAGACAGTGTAATTGGTCTGATAATAATAATCTTAGAAGTGTAACAACAACTGGTGAAGGAAGTAGTGGTGAGGCTAATATGATTAATGGAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCTAAGGAAATAATTGTTACTCATAATCACAGTCAAATTCATAGAGATGAAATGTCTGCTGTTGTTGGTGTCCCTCCTTTAACAAGCTTCACAAATGCCTTGGATATTCAACATCTTAAATCTGATCATTTCGGCTTCATCCCATTTCGAAAAAGCTATGATGAGGTTGGAATAGGAGAAGGTTCTACAACAAGAGAAATGCAAGCATCAGGAGGCTCATGTGATCAGGAAGTGCATGAAAGGCAGCAGCATCATGTATTAGCACATCATCATCATCTACAACATCAGCAACAGCAACATGAACATCATGCACACCAACAGATTAGTGCAAACGCAGCTTTCCATATAAGTAGGCCTTCCAATCCAATCTCCACTATCATCTCTCCACCTCCTCTCCACCACACATCCACCATCATCCTTGATGACAATTCTTACCATGTCTCAACAATCATGCTCCAACAAAATGAAAATTTTCAGCAACAGCAGCAGCAACAACATCATAAACTAGGTGGTGGAAGGTCTGCTTCTGGCTTGGAAGAGGTCATCATGGGGTGCACTTCAACGTCTTCTGATATCAAAGAGGAGTCATCTATTAGAAACCAACAAGAAGCTGAGTGGTTGAAATACTCTTCTTACTGGCCAGTTGATCCTCATGACAACAACAACAACCATCATCATCATGATTAG 1452 0.4029 MMNKMSNVSSSDLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNNLRSVTTTGEGSSGEANMINGRRDSGSGSSSSKEIIVTHNHSQIHRDEMSAVVGVPPLTSFTNALDIQHLKSDHFGFIPFRKSYDEVGIGEGSTTREMQASGGSCDQEVHERQQHHVLAHHHHLQHQQQQHEHHAHQQISANAAFHISRPSNPISTIISPPPLHHTSTIILDDNSYHVSTIMLQQNENFQQQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDIKEESSIRNQQEAEWLKYSSYWPVDPHDNNNNHHHHD* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5160 483 Gene3D NAC domain 55 216 IPR036093 GO:0003677|GO:0006355
Mal7g5160 483 SUPERFAMILY NAC domain 42 212 IPR036093 GO:0003677|GO:0006355
Mal7g5160 483 ProSiteProfiles NAC domain profile. 46 212 IPR003441 GO:0003677|GO:0006355
Mal7g5160 483 MobiDBLite consensus disorder prediction 231 256 - -
Mal7g5160 483 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 458 IPR044799 GO:0003700
Mal7g5160 483 Pfam No apical meristem (NAM) protein 47 193 IPR003441 GO:0003677|GO:0006355
Mal7g5160 483 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5160 Mal-Chr7 120756054 120760784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5160 9 477 NAC Transcription Factor Family AT5G56620 50.417 1.62e-138 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal7g5160 NAM 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5160 - - mtr:MTR_8g102240 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5160 7 120756054 120760784 Mal7g5160 7 120756054 120760784 ECH