Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5155 ATGGGAGATTGTGCGAGAAACATGGTTGCGCTCAACACAGAAGAACATGGAATATTGAAGATGAATGTGTTGCTTCATGTTACCTTGTATGTGGTAGAAGAAGATCAATTTGATCAATATCTTAATTGTAATGGTCAACAAATTGTGGATTTGTTCGAGAAATTGGAAGTCAATCCTCCATCTTTAGATTCTATAGGTAAATGTTCAATTTGCTTGGAGGAGTTTAGCAATGGATCACATTCGGAACTCTTTTATACAAAATGCTCTCATGTTTTCCATAAAGAGTGTATTGGCAAGTGGATCCGTCAATGCATGCATCGTTCATCTTCGCATTCTTGTCCATTGTGTCGACGTGAGATCATATAA 366 0.3716 MGDCARNMVALNTEEHGILKMNVLLHVTLYVVEEDQFDQYLNCNGQQIVDLFEKLEVNPPSLDSIGKCSICLEEFSNGSHSELFYTKCSHVFHKECIGKWIRQCMHRSSSHSCPLCRREII* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5155 121 SMART ring_2 68 116 IPR001841 -
Mal7g5155 121 SUPERFAMILY RING/U-box 67 120 - -
Mal7g5155 121 ProSiteProfiles Zinc finger RING-type profile. 68 117 IPR001841 -
Mal7g5155 121 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 47 117 - -
Mal7g5155 121 Pfam Ring finger domain 67 117 IPR001841 -
Mal7g5155 121 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 47 117 - -
Mal7g5155 121 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 121 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5155 Mal-Chr7 120714568 120714933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5155 49 117 C3H Transcription Factor Family AT5G41430 40.580 2.09e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5155 - K16271 mtr:MTR_8g085520 131.339