Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5153 ATGATGTTAGGAGAACCACCCCATCGTACAAATCCAACCATACACGTGCCACCATGGTCAACGGCGGAGATCTTTCCACCTTTAACCGTCAATGACGATTACTCTCAGTTCTACATGCAAGAAGCGTTGAGCGCTCTTCAACACTACGACGACGCCGATTCTGACTCGGAGATTCTTCCGAGTCATGAATCGGTGGACGCGTATTCAAACGATCATTTCCGCATGTTCGAGTTCAAGGTTCGACGATGCGCACGTGGCAGGTCACATGACTGGACGGAGTGTCCTTTCGCTCATCCCGGCGAAAAGGCTCGCCGCCGTGACCCGAGAAAGTATCAGTACTCCGGCACTTCGTGTCCTGATTTTCGTAAAGGAAGTTGCAAGAAAGGTGATTCGTGTGAGTTCGCGCATGGAGTTTTTGAGTGCTGGCTTCATCCTTCGCGTTACCGTACTCAGCCGTGTAAGGATGGAACAAGTTGCCGCCGGAGAGTTTGTTTCTTCGCTCACACGACTGATCAACTTAGGGCTCCGACTCAACAGAGTCCTCGGAGTGTGAACTCTGTTGATTCGTACGATGGTTCTCCTCTCAGGCTTGCGATTGAGTCCTCCGTTGTGAAATCTCTTCCGTTTTTGTCTTCTCCCGGTTCGGTTTCTCCGCCGGTGGAATCTCCTCCGATGTCTCCGATGACTAGGTCGTTGGGAAGGTCTATGGGTTCTGTGAATGTGAATGAAATGGTGGCTTCTCTGAGAAACTTGCAACTTGGGACGATGAAATCGCTACCTTCTTCATGGAATGTTCAAATGGGTTCTCCTAGATTCGGATCTCCGAGAGGACCCGTGGTCCGACCCGGATTCTGTAGCCTTCCCTCGACGCCTACACAGGCACCGAGGCGTGGTGGTGTTAACCATTTTGATCTTTGGGATCAGAGGTGTGAGGAGGAGCCTGTGATGGAGAGGGTGGAATCTGGAAGGGATATAAGGGTGAAAATGTTTGAGAAACTGAGCAAAGAAAACTCTTTGGATAGATCCGGTTTGGGTATGGATTCGGGTCAGATGGTTGAGGATCCGGATGTTGGGTGGGTTTCGGAGCTGGTGAGCCTTTTCTTGGGCTGA 1110 0.5099 MMLGEPPHRTNPTIHVPPWSTAEIFPPLTVNDDYSQFYMQEALSALQHYDDADSDSEILPSHESVDAYSNDHFRMFEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYQYSGTSCPDFRKGSCKKGDSCEFAHGVFECWLHPSRYRTQPCKDGTSCRRRVCFFAHTTDQLRAPTQQSPRSVNSVDSYDGSPLRLAIESSVVKSLPFLSSPGSVSPPVESPPMSPMTRSLGRSMGSVNVNEMVASLRNLQLGTMKSLPSSWNVQMGSPRFGSPRGPVVRPGFCSLPSTPTQAPRRGGVNHFDLWDQRCEEEPVMERVESGRDIRVKMFEKLSKENSLDRSGLGMDSGQMVEDPDVGWVSELVSLFLG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5153 369 SMART c3hfinal6 147 170 IPR000571 GO:0046872
Mal7g5153 369 SMART c3hfinal6 112 138 IPR000571 GO:0046872
Mal7g5153 369 Gene3D - 113 176 - -
Mal7g5153 369 PANTHER UNKEMPT FAMILY MEMBER 8 364 IPR045234 -
Mal7g5153 369 ProSiteProfiles Zinc finger C3H1-type profile. 112 139 IPR000571 GO:0046872
Mal7g5153 369 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 8 364 - -
Mal7g5153 369 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 118 137 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5153 Mal-Chr7 120668607 120669716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5153 68 174 C2H2 Transcription Factor Family AT5G12850 71.963 1.63e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal7g5153 zf-CCCH 3.5e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5153 - - aprc:113867365 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5153 7 120668607 120669716 Mal7g5153 7 120668607 120669716 ECH