Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5107 ATGAGAGGAAAGGGAACGATTGTTCCACCGTGTTATTCTCGCGGCGGTGGAAAAGCACTTCAAACAGAGAAGGCTAACGGTAAGAAAAATCGAAAACGGAAATGTCTTAAGGATTTGTATGCAACAGGTGACATTGTAAACACCGTGTTGCTGAATGATGGCCCTCCTCTGGGAAGTGAATTCGATTCTCTTCCTTCAGGACCCAAAAATTACACTCCTGCTTGTCTACAGGACCAAAAGCCTGTCAAAAGGAGAAAGTCTTTCAAGAGTGCAATTCAAAATCACCCTAATTGTAATATGAAAGAACCTGTGAAGAGACATGGTATGGGCAAAGGTCTGGTAACAAATCCTAATTGTAATACGAAAGCACCTGTGAAGAGACATGGTATGGGCAAAGGTTTGGCAACAAATCCTAATTGTAGTATGAAAGCACCTGTGAAGAGACATGGTACGGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCATGATGCTAGAGACCTTCCAATCGGTTTTGGTTTTGCTGACAAGGAAGTTCATCTAACCTCTAATTCTAAAACACCGATATCGGTCAACAGGTCACAGAAAGCAGTAACCTTGAATGGAAAGCCAAGAAATAAAATGCCGAATAGGAAAACTACATTACAGGAGAAGAGGAAACTTCTCGTGCAAAAAAGAGTGGGTGAATCAAACCAATATGTGACGCAGAACCAGCCACCCATAGAAAAATGTGAACTTGCTTTAGATAGCTCAATATCTGAGGGAGTTGATCAAATTTCAATGTTAATTGATGATGAAGAGTTAGAGCTGAGAGAGTTACGAGAAGGAACCAATCTGCTTATTTGTTCAGATCAACTTGCTGCCAATGGAATGCTTGGTGGCTCACTTTGTCCAGATGTGCTAGTCAAGTTCCCCCCAGGTGCTGTCAAGATGAAGAAACCTATACATTTGCAACCTTGGGACTCCTCCCCAGAACTGGTGAAGAAATTATTTAAGGTGTTCCATTTCATTTATACATATGCTGTAGTTGTTGATGTTTGTCCCTTCACTCTTGATGAGTTTGTTCAGGCTTTTTATGATATGGACTCAATGTTACTTGGACGGATTCATGTTGCCCTTCTCACACTACTTCTATCTGACATTGAAGTGGAGCTTTCTAATGGGTTTTGTCCTCATTTAAATAAGTCATGCAACTTTCTCGCGTTACTTCACTCTGTTGAAAACCAAGAATATTCTCTTGACGCTTGGAGACGATCTCTAAACCCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTGGTAGCTGCTGGATTCGGTTCCAAGCAAGGTGCCTTTCAAAGAGAGGGCTTTGGCAAGGAATTGGATATTTTTGTAAACTATGGCCTATGCCCTGGCACCTTGAAGTACGAGTTGTTTAAAATCTTGTCAGAACGAGGCAACAACGGATGCAAAGTTTCTGAGCTGGCACAGTCAATGCAGATTGTGGAATTAAACCTTGCCAGCACAACCGAAGAACTAGAGTCTTTTATATATTCCACACTTTCAAGCGATATTACTTTATTTGAAAAGATTTCATCCTCTGCATATCGACTGCGTATGAGCACTGTTTCAAAGGACGATGATGATTGTCAGTCAGATACAGAGGACTCCGGTAGTGTTGATGATGAGCTTAACGACTCTGATACATGTAGCAGCGGAGAAGATTTTGGAAGCGGTTCAATACATTCTAATATAAGAAAATTGAAGCGTGTTAACAGTCGTAAAGCTAAACATAATAAGCTGAAAGTTTACACTGAAATTGACGAGAGCCATGCAGGAGAAGTGTGGTTGTTAGGACTTATGGATGGCGAATACTCGGATTTGAAAATTGAAGAAAAATTGAATGCATTGGCAGCGTTAACTGGTCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAGTAAAAGTTACTGCTGATTGTAGTTCAAGTATCCAATTACGTGGTTCTGGAGCAAAAATTAAGAGATCAGTAGTAAAGGAGCCTGGTTCATTTTTGAACCCAATGGAACAAATGCAATGTATTAAAGAGGTGCACATGAATTCTCACCCCTGTCCAGTAGATTCCTCATTGTTAGTCTCAAAATTCCATATTCAGGAAGCAACCTTGGAGAAAAGAAAAGGTTCAGCTGATTCACACCCCATGCAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATACTGGCTCTTCTTGGGCCCTTGTAATGTAGATGATCCTGGCCATAGGAGGGTTTACTTTGAATCCTCTGAAGATGGTCACTGGGAGGTGATTGATACAGAAGAGGCATTGTGTGCCTTGTTGTCCGTTCTGGATGATAGAGGGAAACGTGAGGCTCTTCTTATTGAATCTTTGGAGAGACGACAAACATCTCTATGCAGATCTATGTCCAAGATTAAGGTTAGCAATATTGGAATGAGGTGTATGTCACATTCTGATCAGTCTGAGCTGGATAGGGTTACAGAAGACAGCTGTTCTCCAATATCTGATGTAGACAACCTGAATCTGACTGAGATTACTAGTGACTCTTTGCCGTCACCTGGAGCCGTGGTAATTGAAGCTGGGAAGAAGGCAGAGGAACAACTGCATAAATGGATCCGTGTTCAAGAATATGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGCAGAAGGTCTTATCTTGACTCTCTCACCAGATGTAGGAGTTGCCATGATCTATACTGGAGAGATGAGAGACACTGTAAAATTTGCCATATGACATTTGAGGTTGATTTTGACCTTGAAGAAAAATATGCAATCCACATAGCGATGTGCAGGGATAAAGAAGACAGCAATACATTTCCAAATCATAAAGTCTTGCCATCACAGATTCAATCATTGAAAGCTGCAATTTATGCAATTGAGTCTGTTATGCCTGAAGACGCCCTAGTTGGTGCTTGGAGGAAGTCTGCTCATAATCTATGGATCAAAAGGCTTAGACGCACCTCGACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAACGAGGGCTGGTTATTTCAGTGCAAATTTCCAGACGGTGTGGTTGAAGAAACAATCGCATCTTTTGCATCAATGCCCCGTACTTCATCTGCCCTTGCTCTATGGTTGGTGAAGTTAGATGCCATAATTGCTCCTTATCTTGACAGAGTCCAAACTCAGAAGTCACAGGGAATCAGTAAGCATGGTTCTCGGTGA 3279 0.4145 MRGKGTIVPPCYSRGGGKALQTEKANGKKNRKRKCLKDLYATGDIVNTVLLNDGPPLGSEFDSLPSGPKNYTPACLQDQKPVKRRKSFKSAIQNHPNCNMKEPVKRHGMGKGLVTNPNCNTKAPVKRHGMGKGLATNPNCSMKAPVKRHGTGKGLMTVWRATNHDARDLPIGFGFADKEVHLTSNSKTPISVNRSQKAVTLNGKPRNKMPNRKTTLQEKRKLLVQKRVGESNQYVTQNQPPIEKCELALDSSISEGVDQISMLIDDEELELRELREGTNLLICSDQLAANGMLGGSLCPDVLVKFPPGAVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYAVVVDVCPFTLDEFVQAFYDMDSMLLGRIHVALLTLLLSDIEVELSNGFCPHLNKSCNFLALLHSVENQEYSLDAWRRSLNPLTWIEILRQVLVAAGFGSKQGAFQREGFGKELDIFVNYGLCPGTLKYELFKILSERGNNGCKVSELAQSMQIVELNLASTTEELESFIYSTLSSDITLFEKISSSAYRLRMSTVSKDDDDCQSDTEDSGSVDDELNDSDTCSSGEDFGSGSIHSNIRKLKRVNSRKAKHNKLKVYTEIDESHAGEVWLLGLMDGEYSDLKIEEKLNALAALTGLLSSGSSIRMKDPVKVTADCSSSIQLRGSGAKIKRSVVKEPGSFLNPMEQMQCIKEVHMNSHPCPVDSSLLVSKFHIQEATLEKRKGSADSHPMQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRSMSKIKVSNIGMRCMSHSDQSELDRVTEDSCSPISDVDNLNLTEITSDSLPSPGAVVIEAGKKAEEQLHKWIRVQEYDSWIWNSFYLDLNVVKYGRRSYLDSLTRCRSCHDLYWRDERHCKICHMTFEVDFDLEEKYAIHIAMCRDKEDSNTFPNHKVLPSQIQSLKAAIYAIESVMPEDALVGAWRKSAHNLWIKRLRRTSTLVELLQVLADFVGAINEGWLFQCKFPDGVVEETIASFASMPRTSSALALWLVKLDAIIAPYLDRVQTQKSQGISKHGSR* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5107 1092 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 605 645 IPR028942 -
Mal7g5107 1092 MobiDBLite consensus disorder prediction 122 149 - -
Mal7g5107 1092 SMART testlast3 325 384 IPR018501 -
Mal7g5107 1092 MobiDBLite consensus disorder prediction 1 30 - -
Mal7g5107 1092 PANTHER OS07G0619600 PROTEIN 25 115 - -
Mal7g5107 1092 Pfam DDT domain 326 381 IPR018501 -
Mal7g5107 1092 MobiDBLite consensus disorder prediction 543 563 - -
Mal7g5107 1092 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 731 804 IPR028941 -
Mal7g5107 1092 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 120 1084 IPR044977 GO:0006357
Mal7g5107 1092 ProSiteProfiles DDT domain profile. 325 384 IPR018501 -
Mal7g5107 1092 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 25 115 IPR044977 GO:0006357
Mal7g5107 1092 PANTHER OS07G0619600 PROTEIN 120 1084 - -
Mal7g5107 1092 MobiDBLite consensus disorder prediction 539 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5107 Mal-Chr7 120214191 120223872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5107 246 1071 Homeobox Transcription Factor Family AT1G28420 26.978 5.50e-77 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mal7g5107 WSD 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5107 - - aprc:113853612 1592.79