Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5105 ATGAACACCACGCAGGAAGAAGGTGCTTCCGCCGCCATCGCCGCCGCAGCTCCCGAAGTAGGAGGAGAAGCAGCAGAGAAGAACGATGGCATAAATTGTGAGCTATGGCAAGCTTGTGCTGGTCCTCTTGTCAATCTTCCTCTACCTGCAACTCATGTCGTTTACTTCCCTCAAGGCCACTCCGAACAGGTTGCAGCGTCTTTGAAGAAAGATGGGGATGTCCAAGTACCAAACTATTCCAATCTTCCCTCCAAGTTGCCCTGTATCCTTCACAACCTCACCTTGCATGCTGATCCAGACACCGATGAAGTATATGCCCGGATGACACTTCAGCCGGTGTCTTCTTTTGACATGGATGCCATATTAAGATCAGATATTTCTCTCAAATCGAACAAGCCACAACCTGAGTTTTTCTGTAAACAACTGACAGCGAGTGATACGAGTACTCATGGAGGTTTCTCTGTACCCCGCCGTGCTGCAGAGAAGATTTTCCCCCCACTTGATTTCTCAGCACAACCTCCTGCTCAAGAACTTGTGGCAAAGGATTTGCATGGTAATGTTTGGAAGTTCCGCCATATATATCGTGGACAACCGAAACGTCACTTGCTTACAACTGGATGGAGTCTATTTATCAGTGGAAAGAGGCTTTTAGCTGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAGCAGTTGCTTTTGGGTATCAGACGAGCAAACAGGCAACCGACCAATTTATCATCCTCAGTACTATCAAGTGATAGTATGCACATTGGAATTCTGGCTGCAGCAGCTCATGCTAGTGCAAACAACAGTCCCTTCACTGTGTTTTATAATCCCAGGGCCAGTCCCTCAGAATTTGTTATTCCATTGGCCAAGTACTACAGGGCAGTATACAGCCACCAAATATCACCTGGCATGCGTTTTCGAATGATGTTTGAAACAGAAGACTCAGGAACAAGAAGGTATATGGGTACAGTTATTGGTGTCAGTGATCTGGATTCCGTGAGATGGAAAAACTCGCAGTGGCGTAATTTGCAGGTTGGTTGGGATGAAGCCACTGCTGGGGAAAGGCGAAGTAGGGTCTCAATCTGGGAAATTGAACCTGTTACTGCTCCATTTTTCATCTGTCCTCCTCCGTTCTTCAGAAACAAGAGACCAAGGCAACCCGGAATGCCTGACGATGAGTCATTTGATTTCAGTAACCTTTTCAAGAGTACAATGCCTTGGCTTAGCGATGATATGTGTATGAAGGATCCCCAGGCTTTCCCTGGCATGAGCTTAGCTCAATGGATGAACATACAGCAAAATCCTGCTATGGCTAGCTCATTGCAACCAAATCATGTGCCTTCCATGCCTGCATCTGTTGTACAAAATCTTCATGGATCCGATATTGCCCATCAATTGGGATTTTCCACTCAACAAATCTCTCAATCAAACAATGTAGCCTTCAATACTCTGGGGATACCTCAGATGCTACCATCCACTTCTAGTGGATTGGGAGCAGTAATGCAGCCAGAACAGCAACATTCTAGACAAAAATTGGCATATCAAACTCTACCACAGAGTGAAGTTCAGACCCAACTTCTTAATCCCCAGAGTATTGTCCAAACAAACAGTATTCTTCAATCACAGCAACCATCCATTCAAAACCATCAACTCCATAGAAGTCTCTCTCAGAACCCACTGCAACAGTTTCAACAGACTATAATTGGTCAGAACCAACCGCAAAATATGATTAGACCCACTATGCCAGATCATATTAATCAACAGTTACATATGTCTGATAATCAGGTTCGGCTTCAGTTGTTACAGAAGCTTCAACAGCAACAACAGACACTCTTGGTTCAGCAATCTGCATTGCAGCAGCCTGCTCAGATTATTCAAAACCAAGACCAGCAGAGGCAACAATTAGATGTAACACACAACTCTAGGGCAATAACTCCCCATCAAGTGTTTGAAATTCCTCCTACGCTTCAAAACTCACTGCCTGAGGCTAATTCTATGAACCATCAGATGACAGATCACAGTAGCCAGGACAATGTTCAGTTCTCCCATCCATCCAAGCAACCAAAGCTTCAACATCAACATCAACAACAGCAAACACAATCCATCTCGCTGTCTAAAATGTCTAGTCATGTTGGACTTCCTTCTGCAACTACAGCTAATCAGTTATCTGCTTCCGGTTGCAGTATGCGGACTGTAGCAACTGGAACAGTGCCATCCGTAAATACTGATGATGCTCCATCTTGTTCCACTTCACCTTCCACAAATAACTGTGCTGGTGCGCTTCCTCCTGTGACAACATCTCAGATCCTTATGAGCACAATAGGGGATGACGTGGCTCAGTCTGCTGTGACGATCTTGAGTCAAAGTTCTAATGCAAATGTGGTAAAATATGTACAGCCAAATTATGAAGTTAAGCCTTGTTTAAACATTTCCGAAAATCACAACCAAGGGAATTTTTACCCTCAGACTTGCTTTAACGGTGGTGCTGTCCAGACAGATTGTTTGGATACGTCGTCTTCTACAACTTCAGTTTGCCTTTCTCAGAGCGATTCACGCTTTCATCAGAATGACAGACCGTTACCTTACTATCCACAGTCAATGTTTTGTAGAGACAACATTCAAAACGTGGAAGTTCAGGCTGATTCTAGGTGTAATGTTGCATATGGCAACAGCATGAATGGGCAAATGAGAATGCCACTGAATCTAGATTCTACAGTAACCAAAGGCACAACAAGGCTGGGCAAGGATTTGTCAAATGATTTCTCTTCAGGAGGCTTGCTTGGGGGCTATGAAAATAACAGTGATGCTCAGCCAGAACTTTCATCTTCCATGGTTTCACAAACATGGGGAGTCCCTGATATGACCTTTAATTCAATTGATTCCACCATAAATGATAGTAGTTTCTTGGATAGTGGTCCATGGGCTCCACCGCCGCCGCCACAACAATTTCAACGGATTAGAACATATACCAAGGTATATAAACGCGGAGCTGTGGGAAGGTCCATAGACATAACAAGATATTCTGGTTACGATGAGCTTAAACATGATCTGGCTCGTAGGTTTGGTATTGAGGGACAACTAGAGGATCGACAACGAGTAGGTTGGAAACTTGTTTATGTAGATCATGAAAATGATGTTCTGCTAGTGGGAGATGACCCTTGGGAGGAGTTTGTCAATTGTGTCCGCTGTATTAAAATACTTTCTCCTCAAGAAGTTCAACAGATGAGCTTAGATGGAGATTTTGGCAATGGTGGCCTTCCAAGACAGGCCAGTAGCAGTTCTGATGGTGGGATTGCTTAA 3309 0.4415 MNTTQEEGASAAIAAAAPEVGGEAAEKNDGINCELWQACAGPLVNLPLPATHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKLPCILHNLTLHADPDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRYMGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTAPFFICPPPFFRNKRPRQPGMPDDESFDFSNLFKSTMPWLSDDMCMKDPQAFPGMSLAQWMNIQQNPAMASSLQPNHVPSMPASVVQNLHGSDIAHQLGFSTQQISQSNNVAFNTLGIPQMLPSTSSGLGAVMQPEQQHSRQKLAYQTLPQSEVQTQLLNPQSIVQTNSILQSQQPSIQNHQLHRSLSQNPLQQFQQTIIGQNQPQNMIRPTMPDHINQQLHMSDNQVRLQLLQKLQQQQQTLLVQQSALQQPAQIIQNQDQQRQQLDVTHNSRAITPHQVFEIPPTLQNSLPEANSMNHQMTDHSSQDNVQFSHPSKQPKLQHQHQQQQTQSISLSKMSSHVGLPSATTANQLSASGCSMRTVATGTVPSVNTDDAPSCSTSPSTNNCAGALPPVTTSQILMSTIGDDVAQSAVTILSQSSNANVVKYVQPNYEVKPCLNISENHNQGNFYPQTCFNGGAVQTDCLDTSSSTTSVCLSQSDSRFHQNDRPLPYYPQSMFCRDNIQNVEVQADSRCNVAYGNSMNGQMRMPLNLDSTVTKGTTRLGKDLSNDFSSGGLLGGYENNSDAQPELSSSMVSQTWGVPDMTFNSIDSTINDSSFLDSGPWAPPPPPQQFQRIRTYTKVYKRGAVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLPRQASSSSDGGIA* 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5105 1102 Gene3D - 136 239 IPR015300 -
Mal7g5105 1102 SMART B3_2 138 240 IPR003340 GO:0003677
Mal7g5105 1102 MobiDBLite consensus disorder prediction 1081 1102 - -
Mal7g5105 1102 SUPERFAMILY CAD & PB1 domains 1003 1068 - -
Mal7g5105 1102 ProSiteProfiles PB1 domain profile. 990 1074 IPR000270 GO:0005515
Mal7g5105 1102 Gene3D - 302 373 - -
Mal7g5105 1102 Gene3D - 985 1079 - -
Mal7g5105 1102 CDD B3_DNA 137 229 IPR003340 GO:0003677
Mal7g5105 1102 Pfam Auxin response factor 264 347 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal7g5105 1102 MobiDBLite consensus disorder prediction 660 713 - -
Mal7g5105 1102 PANTHER AUXIN RESPONSE FACTOR 20 1096 - -
Mal7g5105 1102 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 1096 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g5105 1102 Pfam AUX/IAA family 990 1075 IPR033389 -
Mal7g5105 1102 SUPERFAMILY DNA-binding pseudobarrel domain 128 267 IPR015300 -
Mal7g5105 1102 Pfam B3 DNA binding domain 138 239 IPR003340 GO:0003677
Mal7g5105 1102 ProSiteProfiles B3 DNA-binding domain profile. 138 240 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5105 Mal-Chr7 120185378 120190944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5105 31 481 B3 DNA Binding Superfamily AT1G19220 69.890 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal7g5105 B3 9.5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5105 - - ccaj:109803454 1520.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5105 7 120185378 120190944 Mal7g5105 7 120185378 120190944 ECH