Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5057 ATGGAATCAGATTTCGAGACGAACGATATGCTCTCACTCTCACAGGATCCATTTGATGCCAACGACAATGATAATTTAGATGTTGAAGGGGAAACATGTGGAATATGTATGGATATGGTTATTGACAGGGGAGTATTGGATTGCTGTCAGCACTGGTTCTGCTTTGTATGCATTGACAACTGGGCTACCATCACTAATCTCTGCCCACTTTGCCAGAATGAGTTTCAGTTGATCACATGTGTTCCAGTATATGATACCATAGGGAGCAATAAAGTTGAAGATGGCTCATTCCTCAGAGATGATGATGACTGGTCGATTGAAGGAAATAATAATAGTCTGTCATTTCCGTCATACTACATTGATGAAAATGCAGTTACTTGCTTGGATGGTGATGGCTGCAAAATTCGAAATGGATTGGCAAGTGTTGAAGGAGATTCTGGTCTTGATACATCAATTGCATGTGATTCATGTGATATATGGTATCATGCCTTCTGTGTGGGATTTGATACTGAAGGTACATCTGACAGTACATGGTTATGCCCAAGATGTGTGGTTGATGAAGTTTCTAAAGAAACAGATACTAATTCGATAAAGGAGGCAACCCTGGAATGTAACCCAGATAATAAAAACAGCGAATGCCATGCCGAGGATTCTTTTTCCGGAATAGTGTCTGTGTCCATTGCAGATACTGGAGAGACAGCTGTTGTTGTCTCAATGGTTGACAGAAACAAATGGGTTCCAGAAACAAGCGAGAGACGCCTATTGCCTCCTGAAGTTGATGGGGATATGTTAACGGAATCATGTAATTTAATATCCGACACAAACAATCCGCTGCAGGTAACAGAGAAGACTACTGTATCACCGATAATGAAGGGTGAAGGGTTAGAGCTGTCCTTATCACACACTATGTCCTGTAACCCAACTTCTAAGTCCTTCGTTCATAATGATTTAAAGAAAAGTGATAATGGAACAAGATGTGAACTGAGTAGCTTGGATGGAACCAAGTTATTTGACCAGTCCCATGCCAAAACTAGTCCATGCAAAATTGAATCTGATATGGGTCTTCATCTTGGTTTGTCGGTGGGCTCTTTTTTAACTGTCGATAATGTGGACAAGAGCGAAACAAAAGATCAAGAAATTGATGTCCCGTGCTCAAATCCAGAAGAATTTCCTCTTAAAGGAGATGAAACTGATATCAATGCTTGTGAGGCCGGTGCCAGAATGACTGGTAGAAAGAGGAAGCATTTTGATTACAGTCATGAGCAAGTTCATACAAAAGTTGATGATGAAGATGCCAAGCCGGAACTATCTGTTTACGCAGAAGTTGCTGATGGAGATGCCAAGCCGGAACTATCGGTTAACGCTTCACAAAAGAAAACTAGAGCATCTGCTAGTCAAATGATTAGTGTGAATGACTCGGTCGATGCTCAAATTTCTGACAATGCAAAGAAAAGTCCTCCTTTAAAACATTCTCCAACAAAAGAGATTGTGGCATCAGATATAATGAATATAGTTAAAGGGACGAACCGTAGGCTGTCCAAGGGACTTGCTGACAATAATGCTAGTCAAAAGTTAACTGAAAAGAAAGAAAACATGGCTGGATTGAGGGTTAAGAAGATTTTGAAGAGAGGTTCGGTTGATGGGGAATCATCGTCAGTAGTCCAAAATCTAAGGAAGGAAATTAGAGAAGCTGTCCGCAACAGATCCTCTGTGAACTTAGAGGAGAACCATTTTGATAAAAATCTTCTTGAAGCGTTTAGGGCTGCTATAACAGGGCCTAAAACTGAACTTGTAAATAAGTTGTCCCCTTCAGCTCTGAAGGCAAAGAAGTCAATGTTGCAGAAAGGAAAAGTACGCGAAAATCTAACAAGGAAAATTTTTGGGGCATCCAATGGAAGAAGGAAACGTGCATGGGATAGGGATTGTGAAATTGAGTTTTGGAAATATCGTTGCATGAGAGCTTCAAAGCCTGAAAAGATCGAAACTTTGAAATCAGTTCTTGATCTTCTAAGAAAAAGTTCAGAGAACCCAGAATCAGAGCAAGCTCCCGAGTGTCAGGCCAAGAATCCGATTCTTTCCAGACTGTATATAGCAGATACATCTATTTTCCCTCGGAAAGAGGATGTCAAACCTTTCTCAGAGCAGCCTAAACAAAATAACCCATCAGCAAAAGGACCAAATCAACCTGTTGATAATAAGACTATTAAAGCAACAGAGGTTAATAATCTCTTATCAAAGACCAGAGTTTGTTCATCTGAGAAAAAAGTAGATAAGAAGATTGCACGGGGTCCAGTTGGTAAAGTACATTTAAGCAGTCACTCAGAAGGGACATCAGTTTCCTCTTCAGCTGGTGCCAAAGTCGGCACAAAGGAATCAGGCCTTAAATCTGATTCTGTGAAAGGTGATAAAAGAAAATGGGCCTTGGAGGTTCTTGCGAGGAAAACCGCTGTTGCAAGCAAGAACACTGCAAATGAAAGTCAGGAAGATGATGCAATTTTTAAAGGAAATTATCCTTTGCTTGCCCAGTTACCAACTGATATGAGACCAGTGTTGGCACCTTGTCGCCACAATAAAATTCCTGTATCCGTGCGACAGACACAGCTTTACCGCCTGACGGAACGCTTATTGAAGAACACAAATCTGCCAATCATTCGCAGAACTGCAGACACAGAATTGGCTGTTGCAGATGCAATTAATATTGAAAAGGAGGTTGCTGACAGATCAAACAGCAAGCTAGTGTATCTGAATCTTTGTTCACAAGAGCTATTGCGTCGCACAAATAACACCAAATCCAACGTAGACACAGACACAACTCCACCAACCTCATCATTGCCAGTGCATACTGATCAATCAGAACTAAATACTGATGATCTTTCGACTGACCCTGCAGTTCAAACAGCATTGAAAAATGCTGGTCTGTTTTCTGATTCGCCACCAAGCAGTCCACACAAGAACAATGAAATATGTAATAAAGATGAAGTGTCAGGGCCTGATGATATACTTGAACTAGATTCTCATCCCGAGCTGGATATATATGGTGATTTTGAGTATGATTTGGAAGATGACGATTACATAGGGGCTAGTCTTACAAAGATCCCAAACCTAAAACAAGAGCAAAGTGAATCAAAAGTGAAACTTGTTTTCTCCACTACTAGCTTGAAGAAAACAAATAATGCTTTGGATTGTGCAGCCTGTAAGGGGTCTGAAAACAATGAAGTGCCAGGGGATGCCTCATGCTCACCAAACTGTCACAGTGATGCTATCCACAAGGATTCTACCATTGATGCAGAGATTGGCCAGCCTTCTCTTTCTTCAGGGCTCCTACCATGCGAGGGTGCTGTTGAGCCAGTTGATTCAGAATTTGAAGATTTATATGGCCCTGATAAAGAACCACTTATAAAAAAGTTTCCAGATGGTGAATTAAAATCATTACATGGAGAGGGCAAGGCGGAAACTCAAAGTGAGAATAATAATTATCATAAGGACGAAGAACGTGTCTTAGACAAAGCAGAAAATGGTGCTGAATTTGGGAATGAGAATCTTGCAGAAAATGTGTCTGTCCCCATCATCACTGACAAATCTTCTAATATATCTGGGACCGATAAGAAAATTCAAAGGAAGGAAGAGAAATCTGACATCCCTGCGCAGCAGTCTAACAATGAAAATCAAGTAGCGAAGAAGGTAGAAGCCTACATCAAGGAGCATATCAGGCCACTCTGCAAGAGTGGTGTGATCACGGCTGAACAGTACAGGTGGGCTGTTGCAAAAACAACTGATAAGGTTATGAAGTATCATGGCAAATCAAAGAATGCTAATTTCCTCATAAAGGAAGGTGAGAAAGTAAAAAAACTCGCGGAACAGTATGTAGAAGCAGCCCAACAGAATAGAAAAAATTGA 3897 0.408 MESDFETNDMLSLSQDPFDANDNDNLDVEGETCGICMDMVIDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVEDGSFLRDDDDWSIEGNNNSLSFPSYYIDENAVTCLDGDGCKIRNGLASVEGDSGLDTSIACDSCDIWYHAFCVGFDTEGTSDSTWLCPRCVVDEVSKETDTNSIKEATLECNPDNKNSECHAEDSFSGIVSVSIADTGETAVVVSMVDRNKWVPETSERRLLPPEVDGDMLTESCNLISDTNNPLQVTEKTTVSPIMKGEGLELSLSHTMSCNPTSKSFVHNDLKKSDNGTRCELSSLDGTKLFDQSHAKTSPCKIESDMGLHLGLSVGSFLTVDNVDKSETKDQEIDVPCSNPEEFPLKGDETDINACEAGARMTGRKRKHFDYSHEQVHTKVDDEDAKPELSVYAEVADGDAKPELSVNASQKKTRASASQMISVNDSVDAQISDNAKKSPPLKHSPTKEIVASDIMNIVKGTNRRLSKGLADNNASQKLTEKKENMAGLRVKKILKRGSVDGESSSVVQNLRKEIREAVRNRSSVNLEENHFDKNLLEAFRAAITGPKTELVNKLSPSALKAKKSMLQKGKVRENLTRKIFGASNGRRKRAWDRDCEIEFWKYRCMRASKPEKIETLKSVLDLLRKSSENPESEQAPECQAKNPILSRLYIADTSIFPRKEDVKPFSEQPKQNNPSAKGPNQPVDNKTIKATEVNNLLSKTRVCSSEKKVDKKIARGPVGKVHLSSHSEGTSVSSSAGAKVGTKESGLKSDSVKGDKRKWALEVLARKTAVASKNTANESQEDDAIFKGNYPLLAQLPTDMRPVLAPCRHNKIPVSVRQTQLYRLTERLLKNTNLPIIRRTADTELAVADAINIEKEVADRSNSKLVYLNLCSQELLRRTNNTKSNVDTDTTPPTSSLPVHTDQSELNTDDLSTDPAVQTALKNAGLFSDSPPSSPHKNNEICNKDEVSGPDDILELDSHPELDIYGDFEYDLEDDDYIGASLTKIPNLKQEQSESKVKLVFSTTSLKKTNNALDCAACKGSENNEVPGDASCSPNCHSDAIHKDSTIDAEIGQPSLSSGLLPCEGAVEPVDSEFEDLYGPDKEPLIKKFPDGELKSLHGEGKAETQSENNNYHKDEERVLDKAENGAEFGNENLAENVSVPIITDKSSNISGTDKKIQRKEEKSDIPAQQSNNENQVAKKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTDKVMKYHGKSKNANFLIKEGEKVKKLAEQYVEAAQQNRKN* 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5057 1298 ProSiteProfiles Zinc finger RING-type profile. 33 72 IPR001841 -
Mal7g5057 1298 SMART PHD_3 132 184 IPR001965 -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 928 958 - -
Mal7g5057 1298 ProSitePatterns Zinc finger RING-type signature. 49 58 IPR017907 -
Mal7g5057 1298 SMART ring_2 33 71 IPR001841 -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 714 732 - -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 1192 1222 - -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 767 798 - -
Mal7g5057 1298 ProSiteProfiles Zinc finger PHD-type profile. 65 186 IPR019787 -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 771 787 - -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 1139 1161 - -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 1199 1214 - -
Mal7g5057 1298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 105 IPR013083 -
Mal7g5057 1298 SUPERFAMILY FYVE/PHD zinc finger 146 190 IPR011011 -
Mal7g5057 1298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 190 IPR013083 -
Mal7g5057 1298 PANTHER RING/U-BOX PROTEIN 104 1295 - -
Mal7g5057 1298 Coils Coil 554 574 - -
Mal7g5057 1298 SUPERFAMILY RING/U-box 25 78 - -
Mal7g5057 1298 Pfam PHD-finger 149 184 IPR019787 -
Mal7g5057 1298 Pfam Ring finger domain 32 72 IPR001841 -
Mal7g5057 1298 PANTHER RING FINGER PROTEIN 41, 151 104 1295 - -
Mal7g5057 1298 MobiDBLite consensus disorder prediction 709 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5057 Mal-Chr7 119717138 119732610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5057 33 84 C3H Transcription Factor Family AT3G58030 37.037 8.10e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal7g5057 PHD 4.7e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5057 - - gmx:100808102 1872.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5057 7 119717138 119732610 Mal7g5057 7 119717138 119732610 ECH