Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5046 ATGGCTTCCTCAACTCTAGTACGTGTATTTTTCTATGTCTTCATTATTTTCAACCTTCAAACTTCTAAAGGCAAACAAATTATCTGCAACACCTTATCATGCGGTGATATTGATATTGCTTTTCCTTTCGGTTTAAAAGAAAGTAACCAAGATCCTCTTTGTAGCTATTTACCAAATCCCACCTTCCTACTTTCATGCAACAACCAAAGCCAAACAATTCTCCACCTCCCAAAAACAGAGAGTTTAATCATCAAAAACATCGATTACAAGACCCAAACAATTCAAGTCAACGACCCCAAAGGATGTCTTTCAAAACGGTACTTAGATAACAATTTTAACCTTTCAGGTTCACCTTTTAAGTTAAACCCCCAAGTTTACAACACTTATAACCTCACTTTCATTCGTTGTCCTTCCAACCTAACCGAATCATCTTTGCCCTTAACACCAATATCTTGTTTAAGCAACGATGAAGATCAACATTCAAACTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGTTATAGTTTCATGGGCACCACCAATTGTGTCGACAACGTTGTTGTCTCAAACGTGTGAGGTGATTTCAACGGCTCTTGTTCCATTACCATGGATGGATATTCCTATGTGGCCTTTTTGGCCTGATCTTAATAGTGATGTTGAGTTGGTGTGGACCAAACCAAGATGTGGGAACTGTGTACTTAGTGGTCAAGTTTGTGGGTTCTCTGAGGATAAAAATAGCAGGCTTCAAGTTGAATGTTTCCCTAGTCCTTCCAATCAAGGTCTCTCAAGAAGTGTCAAATACGGCATAGCATTAGGAGTGGGAATACCAGGATTTTTGTGTCTAATTGCCTTTTTTTGCTCTGTATGTGGTAAGATGAGGAGAACGATACCACTTCATGAGCAAAGGAGCTCAAGTTTTCCTACAATAACAATTTCCTTAGAACCACTACCTTCTTTTGCAATGGGTCTTGATGGTGCCACAATTGAAAAGTATCCCAAGATTCTTCTTGGGAAGAGTGGACGGTTATTGAAGCCAAATGACAATACTTGCTCAATTTGTCTATCTGAATATCAACCTAAAGAGACGTTGAGAAGCATCCCCGAGTGTAACCATTATTTTCATGCTGCTTGTATTGATGAGTGGCTCAAAATGAATGGCACATGCCCCATATGTAGAAATTCACCTGAAGCATATTCTTCTTCGGGTCCTTCTTTTTCTTCATTACTGTTGTCCCCAAACTCCTCACCACTGTCTTCTTCACGATAA 1269 0.3924 MASSTLVRVFFYVFIIFNLQTSKGKQIICNTLSCGDIDIAFPFGLKESNQDPLCSYLPNPTFLLSCNNQSQTILHLPKTESLIIKNIDYKTQTIQVNDPKGCLSKRYLDNNFNLSGSPFKLNPQVYNTYNLTFIRCPSNLTESSLPLTPISCLSNDEDQHSNLSSSSSSSSSSVIVSWAPPIVSTTLLSQTCEVISTALVPLPWMDIPMWPFWPDLNSDVELVWTKPRCGNCVLSGQVCGFSEDKNSRLQVECFPSPSNQGLSRSVKYGIALGVGIPGFLCLIAFFCSVCGKMRRTIPLHEQRSSSFPTITISLEPLPSFAMGLDGATIEKYPKILLGKSGRLLKPNDNTCSICLSEYQPKETLRSIPECNHYFHAACIDEWLKMNGTCPICRNSPEAYSSSGPSFSSLLLSPNSSPLSSSR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5046 422 SUPERFAMILY RING/U-box 343 396 - -
Mal7g5046 422 Pfam Wall-associated receptor kinase galacturonan-binding 29 98 IPR025287 GO:0030247
Mal7g5046 422 ProSiteProfiles Zinc finger RING-type profile. 351 393 IPR001841 -
Mal7g5046 422 SMART ring_2 351 392 IPR001841 -
Mal7g5046 422 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 422 - -
Mal7g5046 422 CDD RING-H2_PA-TM-RING 350 393 - -
Mal7g5046 422 Pfam Ring finger domain 349 393 IPR001841 -
Mal7g5046 422 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 422 - -
Mal7g5046 422 MobiDBLite consensus disorder prediction 402 422 - -
Mal7g5046 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 398 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5046 Mal-Chr7 119631150 119635589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5046 25 396 C3H Transcription Factor Family AT2G25410 34.204 7.13e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5046 - - cam:101497311 561.607