Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5045 ATGTTTGACCAAAAAAACTTCATGTTAAACCTTAAAGATTCACCGTTTCGGTTGAGTGATTATTACACTTTTGTTAATTTTTCGTTTCTAAATTGTCCTTCCAATTCAACCGTAACAAATATAGTACCACCTATAAGTTGTTTGAATTTAAGCTCGATGAATTATTCTATTGTGGCTATGATGTCTGATCCTCCTTTTGATACACCGTGGGCATCATTGTGTGAATTTATTTCTTCGGCTTTGATACCGGTGGAAGAGACGAATAATTGGTTGTTTTGGACTGATTATTATTCTAACATACCGTTGCAGTGGGATGATCCTGATTGTGGAAATTGTGAAGCACGTGGAGGAAGATGTGGATTGGTTGGGGAGAATGCTCTTCGTCTTGCTTGTTATGATCTTCCCACCCAAGGTAAAATAATAAGTCTTTCAAGGAAAGTCAAGTATGGTTTAACTATAGGTCTTGGAATACCTGGAGTCCTAGGTATTATTGTGCTTACATGGATGTTTTGCAACAAGAAGAACACAACTAATCAAGTACAACGTCAAACAGGAACTGAATTTTCTACCTTTATTATGACGCACCCCCCAATTTTTGTTATGGGCCTAGATGGGGCAACAATTGATAGATACCCTAAAACCCAGCTTGGTGAAAGTGGAAGATTGCCCAGGCCCAATGACAATATTTGCTCAATATGTCTTTGTGAATACCAGCCTAAAGAAGTATTGAGGACCATTCCTGAGTGTAATCACTATTTTCATGTGAGTTGTATAGATGGATGGCTCAAGACGAATGCTACTTGTCCTTTGTGTCGAAATTTACCAGAGAGATCTACTTCCTTTTCTTCGATTTTGCCTGTATCTCCAACTTCCTAA 876 0.3813 MFDQKNFMLNLKDSPFRLSDYYTFVNFSFLNCPSNSTVTNIVPPISCLNLSSMNYSIVAMMSDPPFDTPWASLCEFISSALIPVEETNNWLFWTDYYSNIPLQWDDPDCGNCEARGGRCGLVGENALRLACYDLPTQGKIISLSRKVKYGLTIGLGIPGVLGIIVLTWMFCNKKNTTNQVQRQTGTEFSTFIMTHPPIFVMGLDGATIDRYPKTQLGESGRLPRPNDNICSICLCEYQPKEVLRTIPECNHYFHVSCIDGWLKTNATCPLCRNLPERSTSFSSILPVSPTS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5045 291 CDD RING-H2_PA-TM-RING 230 272 - -
Mal7g5045 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 276 IPR013083 -
Mal7g5045 291 PANTHER RING-H2 FINGER PROTEIN ATL20-LIKE 7 282 - -
Mal7g5045 291 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 282 - -
Mal7g5045 291 ProSiteProfiles Zinc finger RING-type profile. 230 272 IPR001841 -
Mal7g5045 291 SMART ring_2 230 271 IPR001841 -
Mal7g5045 291 Pfam Ring finger domain 229 272 IPR001841 -
Mal7g5045 291 SUPERFAMILY RING/U-box 225 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5045 Mal-Chr7 119627657 119629568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5045 26 275 C3H Transcription Factor Family AT2G25410 30.418 9.36e-36 130