Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5017 ATGGCCGACGTAGTTGCTGAAATCCCCACAAAGAAACCAAGAGGAACCAGAAAGGCTCTCAAGGAGAAAACATCATCAATCAATGATCCCAACATCTTAACCGGAAACGAATCAACCGTTTCACCCCTTTCTGAGAATCTTTCTAACCCTAAGAAGGGAAAAGCTGCATCAAAGAAACAACAGCCACCAAAGCAACAATCTTTCGAGCAAGATTTGCTCGAGATGCAGGAAAAGATGGAACAGCTGCGTCTTGAGAAGGAGAAGACTGAAGAGATGTTGAAAGCCAAAGATGAGATCTTGAAGCAGAAGGATGAAGAAATCGAGAATCGTGGCAAGGAGCAGGAGAAACTTCAAATTGAGCTTAAGAAATTGCAGAAATTGAAGGAGTTCAAACCCACCATGAATTTGCCTATGGTGAAAGACAAGGAACAAGAAAAGAAGGACAAGAAAAAGAATGGGTGCCCTGAGAAAAAAAGGCCTTCTTCAGCGTACATGTTATGGGTCAAAGACCAATGGCATGAGGTTAAGAAGGCGAATCCAGAGGCGGAATTTAAGGACATTTCAAACATCCTTGGTGCTAAATGGAAGACAGTTACTGAAGAAGAGAAGAAGCCTTATGAGGAGAAATACCAAGCTGAAAAAGAGGCTTATTTGCAAGTAATCACAAAGGAAAAACGTGAGACTGAAGCAATGAAACTGTTGGAAGAGGAACAGAAGCAGAAGACTGCCATGGAATTGCTTGAACAGTTTATGCAATTCAAACAAGAGGCAGAAAAAGAGAGCAAGAAGAACAAGAAAGAGAAGGATCCATTGAAACCAAAGCATCCTATGTCAGCTTTTTTCTTGTTTACTAATGATAGAAGAGCAGCTCTTCTTGCAGACAACAAGGGTGTATTGGAGGTTTCCAAGTTCACATCTGAAGAGTGGAAAAACATGACAGAAGAACAAAAGAGGCCTTATGAAGAGATGGCAAAGAAGAACAGGGAGCAATATGCCCAAGAAATGGAGGCTTACAAACAGAAGAAAGATGAGGAGGCTACAAATCTTATGAAGGAAGAGGAAGAACATATGAAACTTCAGAAACATGAAGCCTTGCAATTGCTCAAGAAAAAGGAAAAAACTGAAAACATGATCAAGGAAACAAAATTGAATCGTCAGAAGAAGAAACATAACAAGGAAGATAAGAATACTGATCCAAACAGGCCTAAAAGGCCTCCATCCTCATATATTCTTTTCAGCAAAGAAGCAAGGAAGAGTATACTGGAGGAACGTCCAGAAGTTGGAGGAAACATGCTTAATACACTTGTTTCATTGAAGTGGAAGGATATGAGTGAGGAAGATAAACAAGTGTGGAACGGGAAAGCATCTGAAGCAATGGATGCATACAAGAAGGAAATGGAGGAATACAACAAATCAATTGTTGCAAAGCTGGAGCAGAAAACCAATGAATGCTAA 1455 0.4034 MADVVAEIPTKKPRGTRKALKEKTSSINDPNILTGNESTVSPLSENLSNPKKGKAASKKQQPPKQQSFEQDLLEMQEKMEQLRLEKEKTEEMLKAKDEILKQKDEEIENRGKEQEKLQIELKKLQKLKEFKPTMNLPMVKDKEQEKKDKKKNGCPEKKRPSSAYMLWVKDQWHEVKKANPEAEFKDISNILGAKWKTVTEEEKKPYEEKYQAEKEAYLQVITKEKRETEAMKLLEEEQKQKTAMELLEQFMQFKQEAEKESKKNKKEKDPLKPKHPMSAFFLFTNDRRAALLADNKGVLEVSKFTSEEWKNMTEEQKRPYEEMAKKNREQYAQEMEAYKQKKDEEATNLMKEEEEHMKLQKHEALQLLKKKEKTENMIKETKLNRQKKKHNKEDKNTDPNRPKRPPSSYILFSKEARKSILEERPEVGGNMLNTLVSLKWKDMSEEDKQVWNGKASEAMDAYKKEMEEYNKSIVAKLEQKTNEC* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5017 484 SUPERFAMILY HMG-box 146 219 IPR036910 -
Mal7g5017 484 Coils Coil 65 127 - -
Mal7g5017 484 Pfam HMG (high mobility group) box 273 339 IPR009071 -
Mal7g5017 484 Pfam HMG (high mobility group) box 402 470 IPR009071 -
Mal7g5017 484 Pfam HMG (high mobility group) box 158 219 IPR009071 -
Mal7g5017 484 Coils Coil 452 483 - -
Mal7g5017 484 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 402 470 IPR009071 -
Mal7g5017 484 SMART hmgende2 401 471 IPR009071 -
Mal7g5017 484 SMART hmgende2 272 340 IPR009071 -
Mal7g5017 484 SMART hmgende2 156 226 IPR009071 -
Mal7g5017 484 CDD HMGB-UBF_HMG-box 158 221 - -
Mal7g5017 484 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 6 479 - -
Mal7g5017 484 MobiDBLite consensus disorder prediction 25 70 - -
Mal7g5017 484 CDD HMG-box 402 467 - -
Mal7g5017 484 MobiDBLite consensus disorder prediction 132 157 - -
Mal7g5017 484 MobiDBLite consensus disorder prediction 1 76 - -
Mal7g5017 484 MobiDBLite consensus disorder prediction 10 24 - -
Mal7g5017 484 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 273 339 IPR009071 -
Mal7g5017 484 Coils Coil 321 355 - -
Mal7g5017 484 MobiDBLite consensus disorder prediction 253 274 - -
Mal7g5017 484 MobiDBLite consensus disorder prediction 132 160 - -
Mal7g5017 484 Gene3D High mobility group box domain 382 473 IPR036910 -
Mal7g5017 484 CDD HMGB-UBF_HMG-box 273 336 - -
Mal7g5017 484 Gene3D High mobility group box domain 256 355 IPR036910 -
Mal7g5017 484 MobiDBLite consensus disorder prediction 311 412 - -
Mal7g5017 484 Coils Coil 243 263 - -
Mal7g5017 484 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 157 225 IPR009071 -
Mal7g5017 484 MobiDBLite consensus disorder prediction 311 382 - -
Mal7g5017 484 SUPERFAMILY HMG-box 260 346 IPR036910 -
Mal7g5017 484 Coils Coil 364 391 - -
Mal7g5017 484 Gene3D High mobility group box domain 156 224 IPR036910 -
Mal7g5017 484 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 6 479 IPR044601 GO:0003677
Mal7g5017 484 MobiDBLite consensus disorder prediction 253 275 - -
Mal7g5017 484 SUPERFAMILY HMG-box 396 472 IPR036910 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal7g5017 HMG_box 3.9e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5017 K09273 - gmx:100783033 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5017 7 119318742 119320991 Mal7g5017 7 119318742 119320991 ECH