Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5009 ATGCCTAAACAACCTCCCAACATCATCAAACACACTCATCACTTCACACAAACCAAACTAATCAACAACACCAACATAAACATAAACATGCCCAAAACTATACAAATACGTTACACCGACCCCGACGCCACCGACTCTTCTTCCGACGAACAACCTCTTTCCAATTTTACCCCTCGTCGCCGAGTCAAAACTTTCATCAACGACATTATCATCGAAAAAGGAACCGTTTCAATTAAAAGAAAAAAGCCAGTTAAAACAAAAACTCCGGCGAGACAACGGCGGCCGGTGATTTACACCGGGAAGAAATACCGGGGAGTTAGACAGAGACCGTGGGGAAAATGGGCGGCGGAGATAAGAGATCCTAAATTTAAGATACGACGGTGGTTGGGAACTTATGAAACTGCTGAAGAAGCTGCTATGGAGTATGATAAAGCTGCCATTGAAATTCGTGGTGCAGACGCGCTAACAAATTTTATTCAACCGGTGACAAAGAAGGTTATAAACTCCGGCAAAGAATGCGTTGTTTCTGCCACTTCAGTACTTCATCATGATCAGTGTTGTACTTCTTCTTCATCAGAAGGTGGTGAATCCGTAACAGTAAAAGAAAATGTTATTGTTCCGATGAATACTGAATCTTCATATGAAAATGATTCAAATGAATGTTCGTCGGAGAATTTGTTTGATGAAGTTTTTGATAAAGAAGATAATATGTTGAAATCTGCAGAGTCTTTTTTTCCAATTCCTAGTGATAATTTATTTGATGAGTTTGGGACAGAGTTAGAAAACATGTTCTTATTCCATGATGATGTGAGTGGAAATTTTGTTGATACTTCAAGCAAGAGTTTGGATTTGGATTTCACAAAATGGAACAGAGATTATGATAATTTTCAGGAGATAGGGGATTTGTTTGGTTCGGATCCTGTTACTGCTTTTTTGATTGATGAAGAAATGAGCAAGTTTTGTAACGGTAGGATTAAGTTGTAA 984 0.3872 MPKQPPNIIKHTHHFTQTKLINNTNININMPKTIQIRYTDPDATDSSSDEQPLSNFTPRRRVKTFINDIIIEKGTVSIKRKKPVKTKTPARQRRPVIYTGKKYRGVRQRPWGKWAAEIRDPKFKIRRWLGTYETAEEAAMEYDKAAIEIRGADALTNFIQPVTKKVINSGKECVVSATSVLHHDQCCTSSSSEGGESVTVKENVIVPMNTESSYENDSNECSSENLFDEVFDKEDNMLKSAESFFPIPSDNLFDEFGTELENMFLFHDDVSGNFVDTSSKSLDLDFTKWNRDYDNFQEIGDLFGSDPVTAFLIDEEMSKFCNGRIKL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5009 327 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 8 307 - -
Mal7g5009 327 SMART rav1_2 102 165 IPR001471 GO:0003700|GO:0006355
Mal7g5009 327 Pfam AP2 domain 102 151 IPR001471 GO:0003700|GO:0006355
Mal7g5009 327 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 8 307 - -
Mal7g5009 327 PRINTS Ethylene responsive element binding protein signature 125 141 IPR001471 GO:0003700|GO:0006355
Mal7g5009 327 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Mal7g5009 327 Gene3D AP2/ERF domain 101 160 IPR036955 GO:0003700|GO:0006355
Mal7g5009 327 CDD AP2 101 158 IPR001471 GO:0003700|GO:0006355
Mal7g5009 327 ProSiteProfiles AP2/ERF domain profile. 102 159 IPR001471 GO:0003700|GO:0006355
Mal7g5009 327 SUPERFAMILY DNA-binding domain 102 159 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5009 Mal-Chr7 119245809 119246792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5009 9 310 AP2-EREBP Transcription Factor Family AT4G23750 36.607 1.76e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g5009 AP2 1.7e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5009 7 119245809 119246792 Mal7g5009 7 119245809 119246792 ECH
Mal6g0255 6 3522285 3523208 Mal7g5009 7 119245809 119246792 PCT