Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4999 ATGGGTGGCAACTGCAGCACCGGTGCCGGCGCCGGAATCAACACCACCACCACTACCACCCACTCCGATCCTCCACCCCGAAACGGCCCAAAAATCCTCCCACAAAACTCCACTCCCTCACCCCCTCAACCACCCTTACCCACCACCCTCGGCCGCATCCTCAACCGTCCAATGGAAGATGTTCGTTCCATCTTCATCTTTGGCCGCGAACTTGGCCGCGGCCAATTCGGCGTTACATATTTAGTAACCCACAAAGTCACCAAAGAACAATTCGCTTGCAAATCAATCGCTACACGGAAACTCATCAACCGTGATGATATCGATGATGTTCGTCGTGAAGTTCAGATCATGCACCATCTCACTGGTCACCGTAACATTGTTGAACTCAAAGGTGCTTATGAGGATAAACACTCTGTTAACCTTGTGATGGAGCTTTGTGCTGGTGGTGAACTTTTTGATCGGATTATTACCAAAGGACATTACTCTGAACGTGCTGCTGCTAACCTTTGCCGCCAGATTGTTACGGTGGTGCATAATTGTCATACTATGGGAGTTATTCATAGAGACTTGAAGCCTGAGAATTTCTTGTTTCTTGGTAAAGATGAGAATTCGCCTCTTAAAGCAACGGATTTTGGTCTCTCTGTGTTTTTCAAACCAGGAGATGTGTTCAAAGATCTGGTTGGGAGTGCCTATTACGTTGCTCCTGAAGTGCTGCGTAGAAGTTATGGGCCTGAAACTGATATTTGGAGTGCTGGGATTATATTATACATTCTGCTTTCTGGTGTCCCCCCCTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCTATTCTTCGTGGACATATTGATTTTGCGTCCGATCCTTGGCCTTCTATATCAAGTAGTGCGAAGGATCTGGTCAAGAAGATGCTACGAGATGACACCAAAGAACGGATTTCAGCAGTTGAAGTACTCAATCATCCTTGGATGAGAGTAGATGGAGATGCATCTGACAAGCCTCTTGATATTGCTGTTTTAAGCAGAATGAAACAGTTCCGAGCAATGAACAAGCTAAAGAAAGTAGCGCTAAAGGTTATTGCCGAAAATCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTCAAATCCATGGATACAGACAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCTAAACTTGGTAGTAAAATGTCAGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTGGACGGTAACGGAACCATCGATTATATTGAGTTTATATCCGCTACCATGCATATGAATAGAATGGAAAGAGAGGATCACTTATATAAAGCATTTGAATATTTTGACCAAGATAAGAGCGGGTACATCACAAAGGAAGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGACGAGAATACAATAAAGGAGATCATTGCCGAAGTTGATACAGACAACGATGCAAGAATTAACTATGATGAGTTTGTAGCAATGATGAGGAAAGGCAACCCAGATATAACCCACAGACGTCGCAAATAA 1548 0.438 MGGNCSTGAGAGINTTTTTTHSDPPPRNGPKILPQNSTPSPPQPPLPTTLGRILNRPMEDVRSIFIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLINRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDKHSVNLVMELCAGGELFDRIITKGHYSERAAANLCRQIVTVVHNCHTMGVIHRDLKPENFLFLGKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPETDIWSAGIILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISSSAKDLVKKMLRDDTKERISAVEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKMSESEVRQLMEAADVDGNGTIDYIEFISATMHMNRMEREDHLYKAFEYFDQDKSGYITKEELESALKKYNMGDENTIKEIIAEVDTDNDARINYDEFVAMMRKGNPDITHRRRK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4999 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mal7g4999 515 Gene3D - 333 508 - -
Mal7g4999 515 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Mal7g4999 515 Pfam Protein kinase domain 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4999 515 CDD STKc_CAMK 65 322 - -
Mal7g4999 515 MobiDBLite consensus disorder prediction 1 25 - -
Mal7g4999 515 MobiDBLite consensus disorder prediction 27 48 - -
Mal7g4999 515 SMART efh_1 370 398 IPR002048 GO:0005509
Mal7g4999 515 SMART efh_1 477 505 IPR002048 GO:0005509
Mal7g4999 515 SMART efh_1 442 470 IPR002048 GO:0005509
Mal7g4999 515 SMART efh_1 406 434 IPR002048 GO:0005509
Mal7g4999 515 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Mal7g4999 515 Gene3D Transferase(Phosphotransferase) domain 1 151 332 - -
Mal7g4999 515 SMART serkin_6 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4999 515 ProSiteProfiles EF-hand calcium-binding domain profile. 474 508 IPR002048 GO:0005509
Mal7g4999 515 Pfam EF-hand domain pair 441 503 IPR002048 GO:0005509
Mal7g4999 515 Pfam EF-hand domain pair 371 431 IPR002048 GO:0005509
Mal7g4999 515 MobiDBLite consensus disorder prediction 1 51 - -
Mal7g4999 515 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Mal7g4999 515 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 32 508 - -
Mal7g4999 515 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Mal7g4999 515 ProSiteProfiles Protein kinase domain profile. 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4999 515 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Mal7g4999 515 SUPERFAMILY Protein kinase-like (PK-like) 65 324 IPR011009 -
Mal7g4999 515 Gene3D Phosphorylase Kinase; domain 1 67 150 - -
Mal7g4999 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 508 - -
Mal7g4999 515 SUPERFAMILY EF-hand 362 503 IPR011992 -
Mal7g4999 515 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Mal7g4999 515 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4999 Mal-Chr7 119063641 119068116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4999 51 515 EF-hand Containing Proteins AT4G23650 79.570 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal7g4999 Pkinase 2.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4999 K13412 - gmx:100777096 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4999 7 119063641 119068116 Mal7g4999 7 119063641 119068116 ECH
Mal6g0235 6 3352751 3358667 Mal7g4999 7 119063641 119068116 PCT