Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4979 ATGGATGAGCTTGCATTCTTAATGGATTGGGATTTGGAAGCTATCAATGAAGTACCAACAACAAATCCTTATTTTTCTCATTTATTTTTTGAACAAGATCATGATGAGTTATTATTTGGAAGTTTTCCAGAATTCTCAAAAACTACTAATGTTCTTATTGACGAATTTGAAGAGCTTTGCAAACCTAATTTCTTTCCTCTTTCATCTCAAACCATCGTTTCAAGTTCTCTAGCTATCCCTAAAGAGCCTGAGCAAGTCAAAGAAATTAAAGCATCAGACAAAGTAGCTTCTCATCAAGATGTGCAAGTTCCAGTATCTAAATGTAAAAGAAGCAAGAAAAACAAGAACAAGAGTATTGTGAAGAAGGTAACCGCTGAGGATGGTACTCTTTGTGATGCATGGGCATGGCGTAAATATGGACAAAAACCAATAAAAGGTTCACCCTATCCTCGAAGCTACTATAGATGTAGCAGTTCCAAAGGATGTTTGGCAAAGAAACAAGTTGAAAAGAATCATTTAGATCCAAAAGTTTATTTGGTTACATACACCGCAGAACACAATCATCCTCAACCAACTCGAAGAAATTCATTAGCTGGAAGCACTAGGAAGAACAATCTTTTAGTTACACATTCTTCAAAGACACCTTTGGTGAAAATTGAAGATGAGGTAATTGTAACAAGTATGCAACAAGAAAGTAAGGGATTGGAGAAAGATGAGCAAGATCTTCTTGAGTGGTTGGATGGTGCTCAAGTATGTGATGATGGATGGATACCATGCAAAGAGCTAGAGGAACTTATTGGACTTGATAATAAGTATCAATAA 822 0.3589 MDELAFLMDWDLEAINEVPTTNPYFSHLFFEQDHDELLFGSFPEFSKTTNVLIDEFEELCKPNFFPLSSQTIVSSSLAIPKEPEQVKEIKASDKVASHQDVQVPVSKCKRSKKNKNKSIVKKVTAEDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLAKKQVEKNHLDPKVYLVTYTAEHNHPQPTRRNSLAGSTRKNNLLVTHSSKTPLVKIEDEVIVTSMQQESKGLEKDEQDLLEWLDGAQVCDDGWIPCKELEELIGLDNKYQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4979 273 SMART WRKY_cls 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal7g4979 273 Pfam WRKY DNA -binding domain 132 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal7g4979 273 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal7g4979 273 ProSiteProfiles WRKY domain profile. 125 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal7g4979 273 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 241 - -
Mal7g4979 273 Gene3D WRKY domain 104 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal7g4979 273 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 241 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4979 Mal-Chr7 118728902 118730065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4979 1 227 WRKY Transcription Factor Family AT4G23550 42.913 2.36e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal7g4979 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4979 K13426 - gmx:102663255 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4979 7 118728902 118730065 Mal7g4979 7 118728902 118730065 ECH
Mal7g4979 7 118728902 118730065 Mal1g2108 1 27590498 27591738 ECH
Mal7g4979 7 118728902 118730065 Mal5g1277 5 22333855 22335686 ECH
Mal7g4979 7 118728902 118730065 Mal3g2774 3 101495093 101496318 ECH