Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4971 ATGGGTCACCATTCTTGCTGCAATCAACAGAAGGTTAAGAGAGGTCTTTGGTCCCCAGAAGAAGATGAAAAGCTCATCACTTACATTACCACTCATGGCTATGGTTGTTGGAGTGAAGTTCCTGACAAAGCTGGGCTTCAAAGGTGTGGTAAGAGTTGTCGGTTGAGATGGATAAATTATTTGAGACCTGATATTAGAAGAGGAAGGTTTACACCTGATGAAGAGAAGTTAATTATTAGTCTTCACAGTGTTGTTGGCAACAGATGGGCTCACATTGCAAGTCACTTACCTGGTAGAACTGACAATGAAATAAAGAATTACTGGAATTCTTGGATCAAAAAGAAAATAAGAAAGCATTCATCAAGCTCTAATTCAACCACCAATAATATTACACAAAATGTTGTTCATCATTCCCACCTCAATTATAATTCTAATAATAAATTAGACCAGTTTTCCAACCAAGAGAATATTGTAACAACAGCAAAACCACCATCATTTCAAGAAACAACCTTGTTTTCTCCCACATGTCCTTTGTTTATGTTTGAGCCTAGTGATTCACTACATGGAACAACAATAGAAAGCAGTCAAAATCTGCAAACAGATCAATACTTCCAAGATTCTATAATTGATTTGAGCTCTGAAACATGGAATCAAGTCCAATCATCACTACCTCCTCCAATATCAACAACTTTTTCAATGGACACAATGAATTATCTACCACCTTTGATAGAGAATGTGGAAAACATGGAAGAGGAAGGAGATCATAGACAAGTACTAGAATGCTTGCAGAGTACTCAATGGATAGATGAAGCACATCAACAATGTCCTAATAACTTTATTTTCTGGGACAATATTGTTCAAGGACATGGAATTGGTGGAGAAGAACAACTACCACCTAATTCATCAAATATGGGAGCAAACAGCTTTCTGAAACTTGCAGGGATTCTTCTTTTCCTTTTGAGGATGATCTTTTTCAATTTTCTCTGTTCCTTTTGA 996 0.3665 MGHHSCCNQQKVKRGLWSPEEDEKLITYITTHGYGCWSEVPDKAGLQRCGKSCRLRWINYLRPDIRRGRFTPDEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKHSSSSNSTTNNITQNVVHHSHLNYNSNNKLDQFSNQENIVTTAKPPSFQETTLFSPTCPLFMFEPSDSLHGTTIESSQNLQTDQYFQDSIIDLSSETWNQVQSSLPPPISTTFSMDTMNYLPPLIENVENMEEEGDHRQVLECLQSTQWIDEAHQQCPNNFIFWDNIVQGHGIGGEEQLPPNSSNMGANSFLKLAGILLFLLRMIFFNFLCSF* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4971 331 PANTHER MYB DOMAIN PROTEIN 55 1 308 - -
Mal7g4971 331 CDD SANT 69 112 IPR001005 -
Mal7g4971 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal7g4971 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal7g4971 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal7g4971 331 CDD SANT 17 61 IPR001005 -
Mal7g4971 331 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal7g4971 331 Gene3D - 6 66 - -
Mal7g4971 331 Gene3D - 69 156 - -
Mal7g4971 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal7g4971 331 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mal7g4971 331 PANTHER MYB TRANSCRIPTION FACTOR 1 308 - -
Mal7g4971 331 SMART sant 66 114 IPR001005 -
Mal7g4971 331 SMART sant 13 63 IPR001005 -
Mal7g4971 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4971 Mal-Chr7 118598172 118600309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4971 1 295 MYB Transcription Factor Family AT1G63910 48.305 2.31e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g4971 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4971 K09422 - gmx:100797787 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4971 7 118598172 118600309 Mal7g4971 7 118598172 118600309 ECH
Mal6g0223 6 3221734 3223408 Mal7g4971 7 118598172 118600309 PCT