Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4970 ATGAGGAATAGGATAACTCAAAATGTGGATCTGTCTTCACCTTTGAGTTTAACCCAGCTCAACCCTGAACTAAGAGTGAGACCGATGGAGGAGTTTATGTACAACACTCCAAGGAGAACCTTGCAAAGTCTTAAGGATTCCACTACTGACTCTCTCTATGTTGTTCTTGGAACTATAACTGGAATTCTGAATGCTGAAAACTTTTGGTACACTGCATGCTCATGCAACAAAGCTGTCATACCAGATTCAGAGATGTATTTTTGTGAAAAATGTGATAAGCATGTTACTAAGGTGTTCCCTAGGTTCCTTATCAAGATAAGAGTGATTGATTTCAGTGATAGTGCAACTATGGTGATGTTTGACAGAGATGCATGTGCCCTGCTCCACAAAAGCTGTGCTGATGTTCTTCAAGAACATAATGGGGCTGTTGGAGAACTCCCTGCAGATTTGGCTGGATTAGTGAACAGGACTTTACTGTTTAAGGTTGAAACAAAGGCTGATTTTAATAGAAGATTTGAACAGTCTTTTTGGATTAGGAAGATTTGCGCTGATCCGGAGGTAATCACTGAATTTAGGAAGAAATGGGATAAAGAGGAGGCTGCTTTCAACAAATCTGCAAATGTGAGTTTCCATTAG 636 0.3994 MRNRITQNVDLSSPLSLTQLNPELRVRPMEEFMYNTPRRTLQSLKDSTTDSLYVVLGTITGILNAENFWYTACSCNKAVIPDSEMYFCEKCDKHVTKVFPRFLIKIRVIDFSDSATMVMFDRDACALLHKSCADVLQEHNGAVGELPADLAGLVNRTLLFKVETKADFNRRFEQSFWIRKICADPEVITEFRKKWDKEEAAFNKSANVSFH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4970 211 Gene3D - 30 184 IPR012340 -
Mal7g4970 211 SUPERFAMILY Nucleic acid-binding proteins 36 179 IPR012340 -
Mal7g4970 211 CDD RPA1_DBD_C 53 199 IPR013955 -
Mal7g4970 211 PANTHER REPLICATION FACTOR A 1, RFA1 14 139 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g4970 211 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 14 139 - -
Mal7g4970 211 Pfam Replication factor-A C terminal domain 57 167 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4970 Mal-Chr7 118589722 118590738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4970 66 182 Core DNA Replication Machinery Family AT5G08020 23.770 4.89e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4970 - - mtr:MTR_4g036240 236.884